Gene Reut_B4420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B4420 
Symbol 
ID3614341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp1077998 
End bp1079107 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content67% 
IMG OID637693850 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_298615 
Protein GI73538248 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCGT CAGAACTCTC CTTCGCCCCG CTGAGCGGGA TCCGCGTGCT CGACTTCTCG 
CACGTCATCG CAGGGCCGCT GGCCACGTTC TACCTCGCGC AACTCGGCGC CACGGTATTG
AAGATGGAAA ACGCAAACGG TGGCGACGTG ATGCGTCGCA CCGAGAAAGG CCGGCAGGGC
TTCGTCGCGC TGAACGCCGG CAAGCAAAGC CATGCGGTAG ACCTTGGCAA CGCGGCAGAC
CTGGCCCGCG CGCTGGAGAT GGCGGCAACC TGCGACGTCG TCGTCGACAA CCTGCGCCCC
GGCGTGCTCG AGCGCTTCGG GCTTGGCTTC GAGGCGATCC GCGCGGTCAA CCCGAAAGTC
GTGTACTGCA CGATCTCGGG CTATGGCCAG CACAGCGGCG ACGTCACCGG CCGGCCGGCG
TACGACCACG TGATCCAGGC CGCCACTGGC ATGGCCTTCA TGGCAGGCAC CGAAGACGAC
CCGCCGATCA AGACCGGCTT TCCGGTCGTC GATGCCGCGA CGGGCATGCA GGCCGCGCTG
GCGATCCTGG CCGGGCTGCG CGAGCGGGAC CGGCTTGGCT GCGCCGTGCA GCTCGATGTG
TCCATGACAG GTGCCGCGCT GCAGCTGATG TACTCGTTCG CGTGCGAGGC GTTGACCAGC
GGCACGACGC CGCCGCGCGT CGGCAACCAG GGCTATTCCG GCAGCCCGAC TGCCGACTTC
TTTGCCACCG AGGATGGCTG GATCGCGCTC GGCGCCAATA CGCCGCGCCA GTTGATGCGG
CTATTGGAAG TGCTCGACCT GTCGCACCTC GCGTCCGATC CGGCTTACTT TGCCGAGCCA
CTGGACCCGG ACACGCCGGT ATCGTTCGTA CGCTCCGTCG ATCCCGCGCG GCTCAAGGCC
GTGATCGCCG ACCGCGTCAG GACGCTTGGG GCGGAAGACC TCGAACACCA TCTCGGCCCG
CGCGGCGTGC CAGCCGCCAA AGTGCGCAAG CTTGGCGAGT TCGCCACGGA AGCGCAGCGG
CATGGACGCG TATCGACCGT CATGCTGAAG GACGAAGACG CTTCGGTGAT CTCTCCGGGG
CTTGGCTTCA GGGTGCGGAC GCATCGCTGA
 
Protein sequence
MNSSELSFAP LSGIRVLDFS HVIAGPLATF YLAQLGATVL KMENANGGDV MRRTEKGRQG 
FVALNAGKQS HAVDLGNAAD LARALEMAAT CDVVVDNLRP GVLERFGLGF EAIRAVNPKV
VYCTISGYGQ HSGDVTGRPA YDHVIQAATG MAFMAGTEDD PPIKTGFPVV DAATGMQAAL
AILAGLRERD RLGCAVQLDV SMTGAALQLM YSFACEALTS GTTPPRVGNQ GYSGSPTADF
FATEDGWIAL GANTPRQLMR LLEVLDLSHL ASDPAYFAEP LDPDTPVSFV RSVDPARLKA
VIADRVRTLG AEDLEHHLGP RGVPAAKVRK LGEFATEAQR HGRVSTVMLK DEDASVISPG
LGFRVRTHR