| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B4344 |
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| Symbol | |
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| ID | 3614245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007348 |
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| Strand | - |
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| Start bp | 1002930 |
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| End bp | 1005053 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637693776 |
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| Product | PAS:GGDEF |
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| Protein accession | YP_298541 |
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| Protein GI | 73538174 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCGGCC GGATAAGCCT GGTGCATCGG CATCGCGATG CCGACGGAGC GAACGGTACA
GGTACCGCGC CGGGTCGGGC CTCCAGGCAG GCTTCCGTCA TTGGCGGGGT CGGCGTGGCT
TGCGCCACCG CGTATCTGTC GCTCGCCGTG CCAACTGCAA CCAGCATCAC GTTGACGGCG
GCAATGCTCG GGCTGTCCGC GACGCTGACG CGGCTCGCCG TGTTGCGCGC ACGGCACAAG
CAGACCGAGT TCAGGAGCGT TCGGCTGAGC CAGCTATACA GCGCACTGAG TCAATGCAAT
CAGGCCATCG CACGTTGCCG CAGTGAATCG GAATTGTTCG AGGACATCTG CCGGGCCGCC
GTGACGATCG GCGGCATGCA GATGACGTGG ATCGGCCTGC TCGATGACAG CAAGAGGCTG
ATGCCATTGG CTGTCCATGG ACAGGGCATG GAGTACCTGC GGGATTTGAA GGTTTCCGCC
GACGAAGCGG ATCCGCATGG ACGCGGACCC ACCGGCCTTG CATTGCGCAG CGATTCGCCG
TACTGGTGCC AGGACGTGCA CGCAGACTCC GCCACGGTTC TCTGGCGAAC GCAGAGCCAG
AGATTTGGCT GGAAGTCATT CGCCGTGCTG CCTTTGCACC GTGGCGATCG CGTGATCGGC
GCCTTGTCGC TCTACGGTTC CCTTGCCTAT GTCTTCGATG CAGTCGTGCG CGACCTGCTG
ATGGACATGG TCAGGAACAT CGACTATGCG CTGGCCAATC TCGACCGGGA AACGGAGCGG
CAGCGCGCCA ACGAAGCACT GCGTGAAAGC GAGCAGCGCT TGCGCACCGT GATCGAGACG
CAGCCGGAGT GTGTCAAGAC CATCGATCGC AGCGGCAATC TGCTGGAAAT GAATGCCGCG
GGTCTCGCGA TGATCGGCGC GGACTCGCTG GCGCAGGCGC AGCGTCATTA CACGGAAGTC
ATCCTTCCCG AGTATCGCGA CGCGTTTGCC GCCTTGCATG CGCGCGTCAT GTCCGGCGAA
AGCGGGCTGC TTGAATTCGA GATTGTCGGC TTGCGCGGCC AGCGCCGCTG GCTGGAAACG
CATGCCACGC CGATGCGAGG CGCCGATGGC TGCGTCACGC GGCTGCTTGC GGTCACGCGC
GATACCACCG ACCGCAAGCA GGCATCGGAT CGCATCCAGC ATCTCGCCCA TTACGACGCA
TTGACGGGGC TGCCCAACCG CCGCCTTGTG GAGAATCGGG CCCGGCAGGC CTTCAGTCAA
GCCTCGGACG GGCACACGCT TGCCATAATG TTCCTGGATC TCGACCTGTT CAAGGACATC
AACGACACGC TGGGGCACAG CGCTGGTGAT GCCTCGCTGA TTGAGCTGGC CCGAAGGCTG
CGTCCCTTGT TGAGCGAGGG CGATGTGTTG GCGAGATTCG GCGGCGACGA GTTCCTGATC
CTGCTGCCCG ATGCCTGCGA ACGTACCGCT GCGCAGACCG CGCAGAAGGT GCTCGACACC
ATCGCGGAGC CCTATCACCT CGGCCCTTAC GACCTGACGG TCAGCGGCTC CATCGGCATT
GCCCTCTACC CGCGCGACGG CACCGACTTC GAAAGCCTTT CGAAGAACGC GGACACTGCC
ATGTACCACG TGAAGAAACA AGGCCGGCGC GGATACTGCT TCTTCACCCC GCAGATGCAG
GCGGGCATGG TCCGCTATCT CAAGGTGGTG GGCGCCTTGC GCCAGGCGCT GCCTCGCAAT
CAGTTTCACC TGCACTATCA GCCCCAGATG TCCATGGACG ACGGCAAGCT GATCGGCGTG
GAGGCGTTGC TGCGCTGGAA TCATCCCGAG CTCGGCGCCG TGTCACCGGC GGAATTCATT
CCGGTGGCCG AGGAGAGCGG TGCAATTCTG CCTATCGGCG AATGGGTCTT GCGGCACGCG
GCACGACAGG CGCGCATTTG GGTGCAGGCA GGCTATACGC CCGTGTTCCA CGGTTCAGTT
CCACCATGCC GACCTTCCCA ACCTGGTTTC ACGCATTCTG GAAGAGGAAG ACCTGCCGGC
GCAGCACCTG GAGCTCGAAC TGACGGAAGG CGTCGCCATG CGCGATCCGC AGCGTGCGAT
CGCCATGATC CAGGAGCTTC ATGA
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| Protein sequence | MSGRISLVHR HRDADGANGT GTAPGRASRQ ASVIGGVGVA CATAYLSLAV PTATSITLTA
AMLGLSATLT RLAVLRARHK QTEFRSVRLS QLYSALSQCN QAIARCRSES ELFEDICRAA
VTIGGMQMTW IGLLDDSKRL MPLAVHGQGM EYLRDLKVSA DEADPHGRGP TGLALRSDSP
YWCQDVHADS ATVLWRTQSQ RFGWKSFAVL PLHRGDRVIG ALSLYGSLAY VFDAVVRDLL
MDMVRNIDYA LANLDRETER QRANEALRES EQRLRTVIET QPECVKTIDR SGNLLEMNAA
GLAMIGADSL AQAQRHYTEV ILPEYRDAFA ALHARVMSGE SGLLEFEIVG LRGQRRWLET
HATPMRGADG CVTRLLAVTR DTTDRKQASD RIQHLAHYDA LTGLPNRRLV ENRARQAFSQ
ASDGHTLAIM FLDLDLFKDI NDTLGHSAGD ASLIELARRL RPLLSEGDVL ARFGGDEFLI
LLPDACERTA AQTAQKVLDT IAEPYHLGPY DLTVSGSIGI ALYPRDGTDF ESLSKNADTA
MYHVKKQGRR GYCFFTPQMQ AGMVRYLKVV GALRQALPRN QFHLHYQPQM SMDDGKLIGV
EALLRWNHPE LGAVSPAEFI PVAEESGAIL PIGEWVLRHA ARQARIWVQA GYTPVFHGSV
PPCRPSQPGF THSGRGRPAG AAPGARTDGR RRHARSAACD RHDPGAS
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