Gene Reut_B4333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B4333 
Symbol 
ID3613037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp989853 
End bp991352 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content69% 
IMG OID637693765 
ProductRND efflux system, outer membrane lipoprotein, NodT 
Protein accessionYP_298530 
Protein GI73538163 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00474819 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACA ACATGATGAA GCAGTACCTG CCCAGGCTTG CGACATTGGC CGCCGCGCTG 
GTGCTCGCCG GTTGCTCGTT GGCGCCGACC TACAAGGTGC CGGAAACGCC CACCGCCGCG
ACCTTCAAGG AGGCCGACGC CGCGGCCGCC GAAGGCGCGC AGTGGAAGAC CGCCGCGCCG
GCCGAAGGCC AGCATCGCGG CGACTGGTGG AAGATCTTTG GCGACGCCGA GCTGGACCGG
CTGATCGACG CGGCCAACAG CTACAACCAG GATCTCGCTG CCGCTGCGGC GCGCCTGAAG
CAGGCGCGGG CATTCACCGG CGCGACGGAA GCGGACCTGT ATCCGCAGCT GAGCGTCGGA
CTCGATCCGA CGCGTTCGCA GCCGTCGGCC GCTTCGCAGG GTTTGCCGGA TGGCACGCGC
GTGGCGCCGC AGACGGTGCT CAAGGCGCGG GCCTTTGCCA GCTACGAGCT TGACCTGTTC
GGCCGTGTGG CCAGCAGCGT GAACGCGGCC CGCGCCGACG AGCAGGGCGC CGAAGACCTG
TACCGTTCGG TGCAGCTCGC GCTGCAAGCC GACACGGCGC AGGCGTACTT TGCGCTGCGC
ACGCTGGACA GCGAACGTAA TCTGCTCAAC GCGACGATCA AGCTGCGTGA AGATGCGCTG
AACTTGCTGC GCAAGCGCTA TGAAGCAGGC GAAACGACGG ATCTGGACCC CGCCCGCGCC
GAAGCCGAAC TCGGCACCGC GCGAGCCGAC CTGGCCGGTA TCGAGCGTCG CCGCGCCAAC
CAGGAACATG CGCTGGCGGT GCTGACCGGC GTGTCGCCGT CGCAGTTCGG GCTCGCCGCG
AAGCCGTTCG ACACGGCACC TGTGGCGGTG CCGGCAGGCT TGCCGTCGGA ACTGCTCGAA
CGCCGCCCTG ACATCACGGC AGCGGAGCGG CAGATGGCAG CCGCCAATGC GCGGATCGGT
GTGGCGAAGG CAGCGTTTTT CCCGCGCATT TCGCTCACGG CGCTGTTCGG CTTCGAGTCG
GCGGACCTGT CAAACCTGTT CAAGTGGTCG TCGCGCACAT GGATGCTTGG CCCGTTGCTG
GGGTCGACGG TGGCGCAGAC CGTATTCGAC GGCGGCCGCA ACAGCTCGAA CCTTGCCGGC
GCCCGCGCTG CGCATGAAGA GAGCGTGGCG CGCTACCGGC AGACCGTACT CGTGGCGTTC
CGCGAGGTCG AGGACAGCCT TGCCGATGTA CGTTGGCTCA GCCAGCAGGC CACGGCACTC
GACAGCGCGC TGGCGGGTGC CCGGCGCGCC CAGCGTACCT CGCGCAGCCG CTATGACGCG
GGCGCCGTCG ATTACCTGAC GGTGATCGAT GCCGACCGGA CCGTGCTGCA ATCGCAGCGC
GATGCCAATG CGGTGGCCGG GCTGCGCGCG GCGGCGACCG TGGCGCTGGT GCGCAGTCTC
GGCGGCGGCT GGGGGCCGGT GCCGGAGTCG GTGGCGTCCG CGTCGGCACC CGCGCAGTAA
 
Protein sequence
MNNNMMKQYL PRLATLAAAL VLAGCSLAPT YKVPETPTAA TFKEADAAAA EGAQWKTAAP 
AEGQHRGDWW KIFGDAELDR LIDAANSYNQ DLAAAAARLK QARAFTGATE ADLYPQLSVG
LDPTRSQPSA ASQGLPDGTR VAPQTVLKAR AFASYELDLF GRVASSVNAA RADEQGAEDL
YRSVQLALQA DTAQAYFALR TLDSERNLLN ATIKLREDAL NLLRKRYEAG ETTDLDPARA
EAELGTARAD LAGIERRRAN QEHALAVLTG VSPSQFGLAA KPFDTAPVAV PAGLPSELLE
RRPDITAAER QMAAANARIG VAKAAFFPRI SLTALFGFES ADLSNLFKWS SRTWMLGPLL
GSTVAQTVFD GGRNSSNLAG ARAAHEESVA RYRQTVLVAF REVEDSLADV RWLSQQATAL
DSALAGARRA QRTSRSRYDA GAVDYLTVID ADRTVLQSQR DANAVAGLRA AATVALVRSL
GGGWGPVPES VASASAPAQ