Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_B4333 |
Symbol | |
ID | 3613037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007348 |
Strand | - |
Start bp | 989853 |
End bp | 991352 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637693765 |
Product | RND efflux system, outer membrane lipoprotein, NodT |
Protein accession | YP_298530 |
Protein GI | 73538163 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00474819 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAACA ACATGATGAA GCAGTACCTG CCCAGGCTTG CGACATTGGC CGCCGCGCTG GTGCTCGCCG GTTGCTCGTT GGCGCCGACC TACAAGGTGC CGGAAACGCC CACCGCCGCG ACCTTCAAGG AGGCCGACGC CGCGGCCGCC GAAGGCGCGC AGTGGAAGAC CGCCGCGCCG GCCGAAGGCC AGCATCGCGG CGACTGGTGG AAGATCTTTG GCGACGCCGA GCTGGACCGG CTGATCGACG CGGCCAACAG CTACAACCAG GATCTCGCTG CCGCTGCGGC GCGCCTGAAG CAGGCGCGGG CATTCACCGG CGCGACGGAA GCGGACCTGT ATCCGCAGCT GAGCGTCGGA CTCGATCCGA CGCGTTCGCA GCCGTCGGCC GCTTCGCAGG GTTTGCCGGA TGGCACGCGC GTGGCGCCGC AGACGGTGCT CAAGGCGCGG GCCTTTGCCA GCTACGAGCT TGACCTGTTC GGCCGTGTGG CCAGCAGCGT GAACGCGGCC CGCGCCGACG AGCAGGGCGC CGAAGACCTG TACCGTTCGG TGCAGCTCGC GCTGCAAGCC GACACGGCGC AGGCGTACTT TGCGCTGCGC ACGCTGGACA GCGAACGTAA TCTGCTCAAC GCGACGATCA AGCTGCGTGA AGATGCGCTG AACTTGCTGC GCAAGCGCTA TGAAGCAGGC GAAACGACGG ATCTGGACCC CGCCCGCGCC GAAGCCGAAC TCGGCACCGC GCGAGCCGAC CTGGCCGGTA TCGAGCGTCG CCGCGCCAAC CAGGAACATG CGCTGGCGGT GCTGACCGGC GTGTCGCCGT CGCAGTTCGG GCTCGCCGCG AAGCCGTTCG ACACGGCACC TGTGGCGGTG CCGGCAGGCT TGCCGTCGGA ACTGCTCGAA CGCCGCCCTG ACATCACGGC AGCGGAGCGG CAGATGGCAG CCGCCAATGC GCGGATCGGT GTGGCGAAGG CAGCGTTTTT CCCGCGCATT TCGCTCACGG CGCTGTTCGG CTTCGAGTCG GCGGACCTGT CAAACCTGTT CAAGTGGTCG TCGCGCACAT GGATGCTTGG CCCGTTGCTG GGGTCGACGG TGGCGCAGAC CGTATTCGAC GGCGGCCGCA ACAGCTCGAA CCTTGCCGGC GCCCGCGCTG CGCATGAAGA GAGCGTGGCG CGCTACCGGC AGACCGTACT CGTGGCGTTC CGCGAGGTCG AGGACAGCCT TGCCGATGTA CGTTGGCTCA GCCAGCAGGC CACGGCACTC GACAGCGCGC TGGCGGGTGC CCGGCGCGCC CAGCGTACCT CGCGCAGCCG CTATGACGCG GGCGCCGTCG ATTACCTGAC GGTGATCGAT GCCGACCGGA CCGTGCTGCA ATCGCAGCGC GATGCCAATG CGGTGGCCGG GCTGCGCGCG GCGGCGACCG TGGCGCTGGT GCGCAGTCTC GGCGGCGGCT GGGGGCCGGT GCCGGAGTCG GTGGCGTCCG CGTCGGCACC CGCGCAGTAA
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Protein sequence | MNNNMMKQYL PRLATLAAAL VLAGCSLAPT YKVPETPTAA TFKEADAAAA EGAQWKTAAP AEGQHRGDWW KIFGDAELDR LIDAANSYNQ DLAAAAARLK QARAFTGATE ADLYPQLSVG LDPTRSQPSA ASQGLPDGTR VAPQTVLKAR AFASYELDLF GRVASSVNAA RADEQGAEDL YRSVQLALQA DTAQAYFALR TLDSERNLLN ATIKLREDAL NLLRKRYEAG ETTDLDPARA EAELGTARAD LAGIERRRAN QEHALAVLTG VSPSQFGLAA KPFDTAPVAV PAGLPSELLE RRPDITAAER QMAAANARIG VAKAAFFPRI SLTALFGFES ADLSNLFKWS SRTWMLGPLL GSTVAQTVFD GGRNSSNLAG ARAAHEESVA RYRQTVLVAF REVEDSLADV RWLSQQATAL DSALAGARRA QRTSRSRYDA GAVDYLTVID ADRTVLQSQR DANAVAGLRA AATVALVRSL GGGWGPVPES VASASAPAQ
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