Gene Reut_B4320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B4320 
Symbol 
ID3613004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp977118 
End bp978458 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content69% 
IMG OID637693752 
Productmajor facilitator transporter 
Protein accessionYP_298517 
Protein GI73538150 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.142601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCGC GCGAGCGCCG CGGCATGGCC GCCATCATGA TCGCCGTGGC CTTGGCCACG 
CTGGACACGG CGATCGCCAA CACCGCTCTG CCTTCGATCG CTGTGGATCT GCGCGCCACG
CCGGCGGCGT CGGTGTGGGT GATCAATGCC TACCAGCTCG CGATGGTGGC GACCTTGCTG
CCGTTCGCGG CGCTGGGCGG CATTCTTGGT CACCGGCGCA TCTATATCGG CGGGGTAACG
CTGTTCATCG CGGCTTCCGT AGTCTGCGCG CTGGCGTGGT CGCTGCCGTC GCTGGCGGCG
GCGCGGGTGC TGCAGGGCAT CGGCGCGAGC GCCATCATGA GCGTCAATAC GGCGCTGATC
AGCGCGATCT TCCCGATCCA ACGGCTCGGC CGCGGGGTAG GGCTCAATGC ATTGGTGGTA
GGGGTCTCGT TCGCACTGGG ACCGACCGTG GCGTCGGTGA TCCTGTCCTT CGGCTCGTGG
CCGTGGCTAT TTGCCGTGAA CTTGCCGATT GGCCTGCTCG CGCTCGGCAT CGCGCGCGGC
GCGCTGCCGC AGACGCCGCG CAGCCAGCAT GGCTTTGATC GCGTGGCGGC GCTGCTGAAC
GTGGTGGCTT TCGCCGCGCT GATCTTCGCA CTCGGCGAGG GGGCACAGCG CGCGCCGCTG
GAAGAGTCGC TGGCGGCCGC GGCCGTCTTC GTCGTCGCCT TCGGCCTGCT GCTGTGGCGC
GAGCGCGGCC ACCCGGCGCC GATGCTGCCC TTGGACCTGT TCCGCCGTCC GATGTTCGCG
CTGTCGACGC TGACCGCGAT CTGCTCGTTT GCCGCGCAAG GCCTCGCCTT CGTTTCACTG
CCGTTCTATT TCCAGCATGT GCTCGGGCGA GGCCAGGTGG AAACCGGCTT CCTGCTGACG
CCATGGTCGG TTGTGGTCGC ACTGATGGCG CCGATCGCGG GGCGCCTGTC CGATCGCTAT
CCGCCGGGCC TGCTCGGTGG CGTCGGGCTG GCTGTGATGA GCGTCGGCAT GGCGTCGCTC
GCGCTGATGC CGGCCAACCC GAGTACGCTG GAGATCGGCA TCCGCATGTG CATCTGTGGT
GCGGGCTTCG GCTTTTTCCA GTCACCCAAC CTGAAGGCGC TGATGGCCAG TGCGCCACGC
GAGCGTAGCG GCGGTGCGAG CGGCGTGATT GCCACCGCGC GGCTGCTGGG CCAGGCCACG
GGCGCGGCGC TTGTCGCGCT GAGCTTTGGC CTCGCTGGCG ACCATGGACC CGGTCTGGCC
CTTGCGCTGG GCGCCGGTTT TGCCGGCGTT GCGGCCATTG CCAGCGGCCT GCGGCTGGTG
ATGCCAGAAG TGAAGCACTG A
 
Protein sequence
MTARERRGMA AIMIAVALAT LDTAIANTAL PSIAVDLRAT PAASVWVINA YQLAMVATLL 
PFAALGGILG HRRIYIGGVT LFIAASVVCA LAWSLPSLAA ARVLQGIGAS AIMSVNTALI
SAIFPIQRLG RGVGLNALVV GVSFALGPTV ASVILSFGSW PWLFAVNLPI GLLALGIARG
ALPQTPRSQH GFDRVAALLN VVAFAALIFA LGEGAQRAPL EESLAAAAVF VVAFGLLLWR
ERGHPAPMLP LDLFRRPMFA LSTLTAICSF AAQGLAFVSL PFYFQHVLGR GQVETGFLLT
PWSVVVALMA PIAGRLSDRY PPGLLGGVGL AVMSVGMASL ALMPANPSTL EIGIRMCICG
AGFGFFQSPN LKALMASAPR ERSGGASGVI ATARLLGQAT GAALVALSFG LAGDHGPGLA
LALGAGFAGV AAIASGLRLV MPEVKH