| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B4276 |
|---|
| Symbol | |
|---|
| ID | 3612588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | - |
|---|
| Start bp | 931719 |
|---|
| End bp | 932525 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637693708 |
|---|
| Product | HpcH/HpaI aldolase |
|---|
| Protein accession | YP_298473 |
|---|
| Protein GI | 73538106 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| TIGRFAM ID | [TIGR02311] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCAC ACAATCCGTT CAAGGCCGCC CTGGCGGCCC GCCAGGCGCA GATCGGCCTC
TGGCTCTCGA TGGCGACGCC TTACCTGGCC GAGGTGTCCG CCACCACCGG CTTCGACTGG
CTCCTGATCG ACGGCGAACA CGCGCCGAAC GACCTGCGTA CGACGTTGCA GGCGCTGCAG
GCTGTTGCGC CTTACCCGGC GCAGCCCGTG GTGCGTGCGC TGGCGGGCGA GGTAGCGCTG
ATCAAGCAGC TGCTCGATAT CGGGGCGAAG AACCTGCTCG TGCCGATGGT CGATACGGCC
GAGCAGGCGG CATCGCTGGT CAGCGCCACA CGCTACCCGC CGCAGGGCAT TCGCGGCGTC
GGCAGTGCGG TAGGACGTGC GTCGCGATGG AGCAGCCGTA CGGACTACCT CGATGTGGCC
GATGACGAGA TCTGCCTGCT GGTGCAGGCG GAAACCGTGA CGGCGCTGAA GAACCTGGAG
GCGATCTGCG CGGTGGAAGG TGTCGACGGC GTGTTCATCG GACCGGCAGA CCTGGCCGCG
TCGATGGGCT ATCGCGGCAA GCCGGGTCAC CCCGAGGTGC AGGCGGCCAT CGAAGGCGCG
ATGCGGACCA TCGTCGCCAG CGGCAAGGCC GCTGGCACGC TGACCTCGGA CACGACGCTC
GCGCGCCGCT ACCTGGAGCT GGGCTGCACG TTCGTAGCGA CCGGTGTGGA CGTGACAATG
TACGCCAACG CTGCGCGACG GCTTGCCGCG GAGTTCAAGC CGCAACAGAC GGCCAGCGCT
GGTAGCGGGC CTTCCGCCGC GTACTGA
|
|---|
| Protein sequence | MPAHNPFKAA LAARQAQIGL WLSMATPYLA EVSATTGFDW LLIDGEHAPN DLRTTLQALQ
AVAPYPAQPV VRALAGEVAL IKQLLDIGAK NLLVPMVDTA EQAASLVSAT RYPPQGIRGV
GSAVGRASRW SSRTDYLDVA DDEICLLVQA ETVTALKNLE AICAVEGVDG VFIGPADLAA
SMGYRGKPGH PEVQAAIEGA MRTIVASGKA AGTLTSDTTL ARRYLELGCT FVATGVDVTM
YANAARRLAA EFKPQQTASA GSGPSAAY
|
|---|
| |