| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B4255 |
|---|
| Symbol | |
|---|
| ID | 3612685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | + |
|---|
| Start bp | 911583 |
|---|
| End bp | 912785 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637693687 |
|---|
| Product | GGDEF |
|---|
| Protein accession | YP_298452 |
|---|
| Protein GI | 73538085 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTCC CTACCGCGCT GCTTGTGATC ACCGCGGCGC TGAGCGCCAT GATGCTGGCC
ATCGTCTGGT CTCTGCGGCG CTGCGGGCTT CCCGGCGTGC CGGACTGGTG CAACGCCAAC
CTGCTTGTCA CCATCTCGCT GGTGCTGTTC ACGCTGCGCG GCTATGTCAA CGACATTTTT
TCGCTGGTCA TGGCAAACGC TGCGCTGGCC GGCGCGCTGG CGCTGTTCTA TGCCGGATGC
GTGCGGTTCT GTGGCGGCCA GCCTCGCTGG GGCAGGCTGG CCGCCGGCCT GCTGGCCACC
ATGGCTGTGG TGGTGGCCTG GCGCTATGTC TTCGATGTCT TCACTACGCG CGTGGTCGCG
GTCTCCGCCT TTCACGCGGT GCTGTGCGCG CTGACGGGCA TCACCCTGAT CCGCTGGCGG
CCCCGTAGTC GCTTTGGCCA CTACCATCTG ACAACGGCCG GCTTCGCGCT GTTTTTCGCG
CTTGGCCACA CCGCGCGAGG GCTGCTGTCG GCGTTCTCGC TGATGGGCGA TCCCTACAGC
CTGCAGTCGC TTGGCCTGAA TACCTTCTTC CTGACCCTGG GTGCCCTTGT CATGCCAGCG
CTGACCATGG GTGCGGTGCT CATGATCCAT GACACCATGG TGCGCAGGCT GGAGGCCATC
GCCAATACCG ATGGACTGAC GGGCGTGATG TCGCGCAAGG CCTGGGAGGA CATGGCTAGC
CGTGCGCTTG CAGCAGGGGC CCGCGGTGGC GTCCCGCCGG CGCTTCTCAT CATCGACATC
GACCGCTTCA AGGGCGTTAA TGACACCTAC GGGCACGCCG CGGGTGATGC TGTCCTCAAG
GGCTTTGCCA GCCTGGCGGG CGCGCAAGTG CGCTCAACTG ATAGCCTTGG CCGGCTCGGC
GGCGAAGAGT TTGCCGTCGT CCTGCCGGCC ACGCGCGTCG CCGATGCCGT GGTCATCGCG
GAACGCATCC GCGCAGGCGC GGAGCAGCAC GCGGTTCGTA TCGGAGAACA CGGCACGATT
GTTCGCTACA CCATCAGCGG CGGCGTGGCG TGCTTGCGCC CCGGCGAGAC CCTCGCCCAG
CTTAGCGCGC GTGCCGATGC CGCGTTGTAC CGGGCCAAGC TGGAAGGCCG CAACCGGATC
GTTGTGCATG AAGACAGGCA GAGCACCGCA ACGGCACCGG CGCGCGAAGC ACTGCCCGCC
TGA
|
|---|
| Protein sequence | MSVPTALLVI TAALSAMMLA IVWSLRRCGL PGVPDWCNAN LLVTISLVLF TLRGYVNDIF
SLVMANAALA GALALFYAGC VRFCGGQPRW GRLAAGLLAT MAVVVAWRYV FDVFTTRVVA
VSAFHAVLCA LTGITLIRWR PRSRFGHYHL TTAGFALFFA LGHTARGLLS AFSLMGDPYS
LQSLGLNTFF LTLGALVMPA LTMGAVLMIH DTMVRRLEAI ANTDGLTGVM SRKAWEDMAS
RALAAGARGG VPPALLIIDI DRFKGVNDTY GHAAGDAVLK GFASLAGAQV RSTDSLGRLG
GEEFAVVLPA TRVADAVVIA ERIRAGAEQH AVRIGEHGTI VRYTISGGVA CLRPGETLAQ
LSARADAALY RAKLEGRNRI VVHEDRQSTA TAPAREALPA
|
|---|
| |