| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B4233 |
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| Symbol | |
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| ID | 3612663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007348 |
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| Strand | + |
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| Start bp | 881313 |
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| End bp | 883376 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637693665 |
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| Product | alpha amylase domain-containing protein |
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| Protein accession | YP_298430 |
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| Protein GI | 73538063 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTTCG CAACATCCCA CCGGCTTGCG GCAGTTTTCT CCCACTGGAA CCGATCCTTT
CAGGCCCAGG AGCTGATCTT GAACCTCACT TCGTTTTTCC TCGGCACCGG TGCAACCTCG
GCCACGCCGC GGCTGGCGCC ACTGGACAGC TTCTCGGCCA GCGCTCCGCA GGTGCCCGCC
GCCAACGACG ATCCGCACAG TTATGCCTTC GGACCGGTGT GGCTGCCTGA AGGCCGCATC
GGCTTTCGGC TGTGGGCGCC GGACGCCGCC CAGCGCGGGG AGTCGGTGCG ACTGGAAATC
GCCGGCATGG GCCCGGTGCG GATGACGGCT TGCGAGAACG GCTGGTACCG CGCTGCAGTG
CCGTGCGCCG ACGGGACGCG CTACTGGTTC CGGCTCGATG ATGGCACTAC CTTTCCCGAC
CCGGCTTCAC GGTGGCAACC GAACGATGTG CACGGCCCCA GCGTCGCGTG CCAGCCCAAG
GCCCGGACCT ATCCCTGGAA GTGTCCCGAC TGGCGCGGGC GACCGTGGCA CGAGGCCGTC
ATCTGCGAAC TGCACGTCGG CCTGTGCGGC GGCTATGCGG GAGCCATGGC GCAGTTGCAG
CGCCTTTCCG CGCTCGGCTT CACCGCCGTG GAACTGATGC CGCTGGCCGA GTTTCCCGGC
GCGCGCAACT GGGGCTACGA CGGCGTGCTG CCGTTCGCCC CCGAGTCCGG CTATGGCAAG
CCTGACGACC TGCGCGCACT GGTCGATGAA GCCCACAGCC TCGGCATGAT GGTGTTGCTC
GACGTGGTGT ACAACCATTT CGGGCCGGAG GGCAACTACC TGCATCACTA TGCGAGCGCA
TTCTTCCGTC AAGACCGGCA GACGCCGTGG GGCCCTGCCC TTGACTTCCG CCGCCGCGAA
GTGCGCCGCT TCTTTACCGA AAACGCGCGC TACTGGCTGG AAGAATTCCG CTTCGACGGC
CTGCGCCTGG ACGCCGTCCA TGCGATCGAC GACGAAGGCT GGCTCACCAC GCTGCCGTCG
GACCTGCGGG CGTTGCACGG CTTGCAAGGA CGCCATGTCC ACCTGGTGCT CGAAAACGAC
CACAACGACG CCTCGCTGCT GTCCGCGGGC TTCGATGCGC AATGGAACGA TGACGCGCAC
CACGCGCTGC ATGTGCTGCT GACCGGCGAA CAGGACGGCT ACTATCGCGA CTACGGCGCA
ACCCCGGGGC GCCCGGCAAA CACCAGCCAG AATGCAGGCC AGAACACACC GCTGAGGCAC
CTTGCCCGCG TACTGCGCGA AGGCTTCGCC TACCAGGGTG AAGTGTCGCC GTACCGCTCG
GAATGCGATC CTGCGCAGGG GCCGGTCCGT CGGGGCAAGC CCAGTGGCCA CCTGCCGCCC
ACGGCCTTTG TGAGCTTCCT GCAGAACCAT GACCAGATCG GCAACCGGGC CTTCGGCGAC
AGGCTGGCTA CCCTGGCTGA TCCGGATGCG TTGCGCGTGG CAGTCGCCCT CCAACTGCTT
TGCCCGCAGG TGCCGCTGGT GTTCATGGGC GAGGAATGCG GCGCGCAGAC GCCCTTCTAC
TACTTCACAA GCCATCCGCC GGAATTGGCC GAGGCGGTCC GCCAGGGGCG CAGGCAGGAA
TTCGCGGGCA TGGCCGCATT TCGCGACGAA TCTCAGGCGC TAGAGATTCC CGACCCGAAC
GACCCGGCAA CATTCGAGGC CTCGCGCCCG CCGATGGATG TGGAGAACGA CTGGACGCGC
TACTACCGCA GGCTGCTCGC CATCCGGCGC GAATGGCTCA TGCACCGGCT GCCGCGCGCG
CGCATTTCGG GCGTCGATGT GCTCGGACCA GCGGCGCTGC GCGCACGCTG GCGCCTGGGC
GACGGCACGT GCCTGTCGAT CTGGGTGAAC CTGGGCGAGC ATGTCGCGGC TTGCCAGCCG
CCCGCGCCGG GTTACGCGGT GCTCCACGAA ACAGCCAGCG GCCACGCGGA TGCCGTCGCC
GGCGGTTCGC TGCCGGCCAT GAGCTGCATC GCCATCCTGT CCGGCCATGG CGAGCAAGCC
CATGGCGCCG GCGGCGCCCG CTGA
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| Protein sequence | MEFATSHRLA AVFSHWNRSF QAQELILNLT SFFLGTGATS ATPRLAPLDS FSASAPQVPA
ANDDPHSYAF GPVWLPEGRI GFRLWAPDAA QRGESVRLEI AGMGPVRMTA CENGWYRAAV
PCADGTRYWF RLDDGTTFPD PASRWQPNDV HGPSVACQPK ARTYPWKCPD WRGRPWHEAV
ICELHVGLCG GYAGAMAQLQ RLSALGFTAV ELMPLAEFPG ARNWGYDGVL PFAPESGYGK
PDDLRALVDE AHSLGMMVLL DVVYNHFGPE GNYLHHYASA FFRQDRQTPW GPALDFRRRE
VRRFFTENAR YWLEEFRFDG LRLDAVHAID DEGWLTTLPS DLRALHGLQG RHVHLVLEND
HNDASLLSAG FDAQWNDDAH HALHVLLTGE QDGYYRDYGA TPGRPANTSQ NAGQNTPLRH
LARVLREGFA YQGEVSPYRS ECDPAQGPVR RGKPSGHLPP TAFVSFLQNH DQIGNRAFGD
RLATLADPDA LRVAVALQLL CPQVPLVFMG EECGAQTPFY YFTSHPPELA EAVRQGRRQE
FAGMAAFRDE SQALEIPDPN DPATFEASRP PMDVENDWTR YYRRLLAIRR EWLMHRLPRA
RISGVDVLGP AALRARWRLG DGTCLSIWVN LGEHVAACQP PAPGYAVLHE TASGHADAVA
GGSLPAMSCI AILSGHGEQA HGAGGAR
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