Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_B4228 |
Symbol | |
ID | 3612658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007348 |
Strand | + |
Start bp | 868605 |
End bp | 871970 |
Gene Length | 3366 bp |
Protein Length | 1121 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637693660 |
Product | alpha amylase domain-containing protein |
Protein accession | YP_298425 |
Protein GI | 73538058 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases [COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
TIGRFAM ID | [TIGR02456] trehalose synthase [TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGCC TGACCGAACC CGCCAACGCC CTGCTGCTCA ACGCGGATCC GCTCTGGTAC AAGGACGCGG TGGTCTACCA GCTTCATATC AAGTCCTTCT ACGACGCGAA CGGCGACGGC GTGGGGGACT TCGCGGGCCT GCTGGCCAAG CTGGACTACC TGGTCGACCT CGGCATTGAC ACGATCTGGC TGCTGCCGTT CTACCCGTCT CCGCGGCGCG ATGACGGCTA CGACATTGCG GATTACCGCA ACGTGCATCC CGACTACGGC ACGCTCGCCG AAGCCCGCCG CTTCGTCGGG GCTGCGCATG CGCGCGGCAT CCGCGTCATC ACGGAACTGG TCATCAACCA CACCTCGGAC CAGCATCCGT GGTTCCAGCG AGCGCGCAAG GCCAAGCCGG GCTCCGCCGC GCGCCGCTAC TACGTGTGGG CCGACAATGA CCAGGCCTAT GCCGGCACCC GCATCATCTT CTGCGACACC GAGAAATCGA ACTGGAGCTG GGACCCTGTC GCCGGCGCGT ACTTCTGGCA CCGCTTCTAT TCGCACCAGC CCGACCTGAA CTTCGACAAC CCGCAGGTCA TGAACGAGGT GCTGTCGGTC ATGCGGTTCT GGCTGGACAT CGGCGTGGAC GGGCTGCGGC TGGACGCTGT GCCTTACCTC GTCGAACGCG AAGGCACCAC GAACGAGAAC CTGCCCGAGA CTCATACCGC GATCCGGCAT ATCCGCTCGC ATCTCGATTC CCACTACCAG GGACGCGTGC TGCTCGCCGA GGCCAACATG TGGCCAGAAG ATGCGCAGCA GTACTTCGGG CGCAGCAGCA CCGGCGACAA GGGCGACGAA TGCCATATGG CCTTCCACTT CCCGCTCATG CCGCGCATGT ACATGGCCAT CGCACGCGAA GACCGCTTCC CGATCACCGA CATCATGCGC CAGACGCCGG AGCTGCCGAC CGACTGCCAG TGGGCGATCT TCCTGCGCAA CCATGACGAA CTGACGCTCG AGATGGTCAC CAGCAGTGAG CGCGACTACC TGTGGGAAGT CTATGCGTCG GACCGGCGCG CACGCATCAA CCTTGGCATC CGGCGCAGGC TGGCGCCGCT GATGGAACGC GACCGGCGTC GCATCGAACT GATGAACAGC CTGCTGTTTT CCATGCCGGG CACGCCAGTG ATCTACTACG GCGACGAGAT CGGCATGGGC GACAACATCC ACCTTGGCGA CCGGGACGGC GTGCGCACGC CGATGCAGTG GTCGCCCGAC CGCAATGGCG GCTTCTCGCA CGCGGACCCC GAGCGCCTGG TGCTGCCGCC GCTGCAGGGC CCCCTGTACG GCTACGAGGC CGTCAACGTC GAAGCGCAGG CGCGCGATCC GCATTCGCTG CTCAACTGGA TGCGCCGCAT GCTGGCGCTG CGGCGCAAGC ACCGCGCGTT CGGGCGGGGC ACGCTGCGCT TCCTGTTTCC GGGAAACCGC AAGATCCTGG CCTATCTGCG CGAGTACGAA GGCGAGCACA TCCTGTGCGT CGCGAACCTG TCGCGGGCGC CGCAGGCCGT GGAACTCGAT CTTTCGGCCT TCAACGGGCG CGTGCCGGTG GAGATGATGG GCGCCACGCC GTTCCCCGCG ATCGGCACGC TGACCTACCT GCTGACGCTG CCCCCCTATG GCTTCTACTG GTTCGTGCTC AGCGAGGATG CCCATCCGCC TGCCTGGCAC GTCTCGGCCC CGGAACAGAT GCCCGACCAG ATCACGCTCG TGCTGCAGAA CAAGGGGCGG CCCGAACTGA CGGAGGCCGC GCGCCGCATG CTCAACGATG AAGTGCTGCC GCCCTATATC CGCCGCCGGC GCTGGTTCGG CGCGAAGGAC GACAGCATCC AGCGCGCCAC ACTCGCCTAC ATGGCCCCGT TCACCAAAGG CACCACAGGC GAGGAAATCT ATCTCGGCGA AGTGGAAGTC AGGCTTTCCG GCGGCCGTAC CGAGCGCTAC CAGCTTCCGC TTGGGGTGCT GTGGGACCGC GAGAGTGCCG ATAGCGTGTC CCAGCTGGCG CACGGGCTGT CGATGGCGCG CGTACGCCAG GGCAGCCGGG TAGGACTGGC CACGGATGGC TTCGTGCTGG AACCGTTCGC GCGCGAGGTC ATCCGCGCGC TGCGTGCAGA CGCCGAACTG CAGGGGCCAC AGGAGACCAT CCGCTTCCGC TCCGAGCCCG GGCTGTCCGC GGTACAGCCC GAGCAGGAGG AAATCCAGTG GATGTCAGCG GAGCAGTCCA ACAGCTCGCT GGCGTACAAC AACACGGCCG TGCTCAAGCT GGTGCGGCGC CTCTCCGGCG GCACACATCC GGAAGTGGAG ATGACGCGCT ACCTGACGGC GCAGGGTTAT CCGCATTCCC CTCCCCTGCT GGGCGAGGTG GTCCGGACCG GCGCGGACGG CGTGCCCCAT ACGCTGATGA TGGTGCAGGG CTACATCCTG AACCAGGGCA ACGGCTGGGA CTGGACGCTC GACTACCTCA GTCGCGTGAT CGATGACGCG CTGCCCGCGC AGGAAAGCGC GGACGAGTTC GCCGAAGCGA TGAACGGCTA CGCCACCATG GCCGGCACGC TCGGCCGACG GCTGGCCGAG TTGCATGCAG TGCTCGCGCG TCCCACCGAC GATCCCGCCT TTGCCCCGCG GCCGGCTACC GATGCTGAAA CGCGGCAGTG GGCCGAGCAG GCCATGGCGG CTATCACGCA TGCACTGGCA TTGCTGGAAA AGCGCGCGCA GAACGACCCG AAATCCGCAA GCAAGCGCTT CATGGCCGAC GTCGATACGC TGCTGAAGGC GCGCGACGCC CTGCCCGCAC TGGTCAACCG GCTTGCCGCA GCCGCGCCCG GCAGCCTGCA GACACGATTC CACGGCGACT TCCACCTGGG CCAGGTGCTG ATTGCGCAGA ACGACACCTA CCTGGTGGAT TTCGAAGGCG AGCCGGGTCA GCCACTCGAC TGGCGCCGGC GCAAAACCTC GCCACTGCGC GATGTTGCGG GGCTGCTGCG TTCGATCGAC TACGCCGCTG CGACCGTTGG CACGGACCGG CAGGAACGCA CCCACGCGGA GTTGCCGCCC GCGCTGGCGG AGCGCCGCGG CGGCTTGCTC GAACGCTTCC GCGAAACCGC CAGCGACGCC TTCCTGGGCT GCTACCGGCG TCATATGGAG GCCTCCGGCA CGCCGTGGGC CGACAACGCG CAGTTTCAGC CGCTACTCGA TCTGTTCCTG CTGGAACGCG CTGCGTACGA AGTCGAATAT GAAGCGGCCA ATCGCGTCGC CTGGATCGAC CTTCCGGCCA GCGGGCTCGC GCGCATGGTG CGCAAGCTCA TGGCCGGAAA CCTGGAGGCG CAATGA
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Protein sequence | MKRLTEPANA LLLNADPLWY KDAVVYQLHI KSFYDANGDG VGDFAGLLAK LDYLVDLGID TIWLLPFYPS PRRDDGYDIA DYRNVHPDYG TLAEARRFVG AAHARGIRVI TELVINHTSD QHPWFQRARK AKPGSAARRY YVWADNDQAY AGTRIIFCDT EKSNWSWDPV AGAYFWHRFY SHQPDLNFDN PQVMNEVLSV MRFWLDIGVD GLRLDAVPYL VEREGTTNEN LPETHTAIRH IRSHLDSHYQ GRVLLAEANM WPEDAQQYFG RSSTGDKGDE CHMAFHFPLM PRMYMAIARE DRFPITDIMR QTPELPTDCQ WAIFLRNHDE LTLEMVTSSE RDYLWEVYAS DRRARINLGI RRRLAPLMER DRRRIELMNS LLFSMPGTPV IYYGDEIGMG DNIHLGDRDG VRTPMQWSPD RNGGFSHADP ERLVLPPLQG PLYGYEAVNV EAQARDPHSL LNWMRRMLAL RRKHRAFGRG TLRFLFPGNR KILAYLREYE GEHILCVANL SRAPQAVELD LSAFNGRVPV EMMGATPFPA IGTLTYLLTL PPYGFYWFVL SEDAHPPAWH VSAPEQMPDQ ITLVLQNKGR PELTEAARRM LNDEVLPPYI RRRRWFGAKD DSIQRATLAY MAPFTKGTTG EEIYLGEVEV RLSGGRTERY QLPLGVLWDR ESADSVSQLA HGLSMARVRQ GSRVGLATDG FVLEPFAREV IRALRADAEL QGPQETIRFR SEPGLSAVQP EQEEIQWMSA EQSNSSLAYN NTAVLKLVRR LSGGTHPEVE MTRYLTAQGY PHSPPLLGEV VRTGADGVPH TLMMVQGYIL NQGNGWDWTL DYLSRVIDDA LPAQESADEF AEAMNGYATM AGTLGRRLAE LHAVLARPTD DPAFAPRPAT DAETRQWAEQ AMAAITHALA LLEKRAQNDP KSASKRFMAD VDTLLKARDA LPALVNRLAA AAPGSLQTRF HGDFHLGQVL IAQNDTYLVD FEGEPGQPLD WRRRKTSPLR DVAGLLRSID YAAATVGTDR QERTHAELPP ALAERRGGLL ERFRETASDA FLGCYRRHME ASGTPWADNA QFQPLLDLFL LERAAYEVEY EAANRVAWID LPASGLARMV RKLMAGNLEA Q
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