Gene Reut_B4228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B4228 
Symbol 
ID3612658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp868605 
End bp871970 
Gene Length3366 bp 
Protein Length1121 aa 
Translation table11 
GC content66% 
IMG OID637693660 
Productalpha amylase domain-containing protein 
Protein accessionYP_298425 
Protein GI73538058 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases
[COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis 
TIGRFAM ID[TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCC TGACCGAACC CGCCAACGCC CTGCTGCTCA ACGCGGATCC GCTCTGGTAC 
AAGGACGCGG TGGTCTACCA GCTTCATATC AAGTCCTTCT ACGACGCGAA CGGCGACGGC
GTGGGGGACT TCGCGGGCCT GCTGGCCAAG CTGGACTACC TGGTCGACCT CGGCATTGAC
ACGATCTGGC TGCTGCCGTT CTACCCGTCT CCGCGGCGCG ATGACGGCTA CGACATTGCG
GATTACCGCA ACGTGCATCC CGACTACGGC ACGCTCGCCG AAGCCCGCCG CTTCGTCGGG
GCTGCGCATG CGCGCGGCAT CCGCGTCATC ACGGAACTGG TCATCAACCA CACCTCGGAC
CAGCATCCGT GGTTCCAGCG AGCGCGCAAG GCCAAGCCGG GCTCCGCCGC GCGCCGCTAC
TACGTGTGGG CCGACAATGA CCAGGCCTAT GCCGGCACCC GCATCATCTT CTGCGACACC
GAGAAATCGA ACTGGAGCTG GGACCCTGTC GCCGGCGCGT ACTTCTGGCA CCGCTTCTAT
TCGCACCAGC CCGACCTGAA CTTCGACAAC CCGCAGGTCA TGAACGAGGT GCTGTCGGTC
ATGCGGTTCT GGCTGGACAT CGGCGTGGAC GGGCTGCGGC TGGACGCTGT GCCTTACCTC
GTCGAACGCG AAGGCACCAC GAACGAGAAC CTGCCCGAGA CTCATACCGC GATCCGGCAT
ATCCGCTCGC ATCTCGATTC CCACTACCAG GGACGCGTGC TGCTCGCCGA GGCCAACATG
TGGCCAGAAG ATGCGCAGCA GTACTTCGGG CGCAGCAGCA CCGGCGACAA GGGCGACGAA
TGCCATATGG CCTTCCACTT CCCGCTCATG CCGCGCATGT ACATGGCCAT CGCACGCGAA
GACCGCTTCC CGATCACCGA CATCATGCGC CAGACGCCGG AGCTGCCGAC CGACTGCCAG
TGGGCGATCT TCCTGCGCAA CCATGACGAA CTGACGCTCG AGATGGTCAC CAGCAGTGAG
CGCGACTACC TGTGGGAAGT CTATGCGTCG GACCGGCGCG CACGCATCAA CCTTGGCATC
CGGCGCAGGC TGGCGCCGCT GATGGAACGC GACCGGCGTC GCATCGAACT GATGAACAGC
CTGCTGTTTT CCATGCCGGG CACGCCAGTG ATCTACTACG GCGACGAGAT CGGCATGGGC
GACAACATCC ACCTTGGCGA CCGGGACGGC GTGCGCACGC CGATGCAGTG GTCGCCCGAC
CGCAATGGCG GCTTCTCGCA CGCGGACCCC GAGCGCCTGG TGCTGCCGCC GCTGCAGGGC
CCCCTGTACG GCTACGAGGC CGTCAACGTC GAAGCGCAGG CGCGCGATCC GCATTCGCTG
CTCAACTGGA TGCGCCGCAT GCTGGCGCTG CGGCGCAAGC ACCGCGCGTT CGGGCGGGGC
ACGCTGCGCT TCCTGTTTCC GGGAAACCGC AAGATCCTGG CCTATCTGCG CGAGTACGAA
GGCGAGCACA TCCTGTGCGT CGCGAACCTG TCGCGGGCGC CGCAGGCCGT GGAACTCGAT
CTTTCGGCCT TCAACGGGCG CGTGCCGGTG GAGATGATGG GCGCCACGCC GTTCCCCGCG
ATCGGCACGC TGACCTACCT GCTGACGCTG CCCCCCTATG GCTTCTACTG GTTCGTGCTC
AGCGAGGATG CCCATCCGCC TGCCTGGCAC GTCTCGGCCC CGGAACAGAT GCCCGACCAG
ATCACGCTCG TGCTGCAGAA CAAGGGGCGG CCCGAACTGA CGGAGGCCGC GCGCCGCATG
CTCAACGATG AAGTGCTGCC GCCCTATATC CGCCGCCGGC GCTGGTTCGG CGCGAAGGAC
GACAGCATCC AGCGCGCCAC ACTCGCCTAC ATGGCCCCGT TCACCAAAGG CACCACAGGC
GAGGAAATCT ATCTCGGCGA AGTGGAAGTC AGGCTTTCCG GCGGCCGTAC CGAGCGCTAC
CAGCTTCCGC TTGGGGTGCT GTGGGACCGC GAGAGTGCCG ATAGCGTGTC CCAGCTGGCG
CACGGGCTGT CGATGGCGCG CGTACGCCAG GGCAGCCGGG TAGGACTGGC CACGGATGGC
TTCGTGCTGG AACCGTTCGC GCGCGAGGTC ATCCGCGCGC TGCGTGCAGA CGCCGAACTG
CAGGGGCCAC AGGAGACCAT CCGCTTCCGC TCCGAGCCCG GGCTGTCCGC GGTACAGCCC
GAGCAGGAGG AAATCCAGTG GATGTCAGCG GAGCAGTCCA ACAGCTCGCT GGCGTACAAC
AACACGGCCG TGCTCAAGCT GGTGCGGCGC CTCTCCGGCG GCACACATCC GGAAGTGGAG
ATGACGCGCT ACCTGACGGC GCAGGGTTAT CCGCATTCCC CTCCCCTGCT GGGCGAGGTG
GTCCGGACCG GCGCGGACGG CGTGCCCCAT ACGCTGATGA TGGTGCAGGG CTACATCCTG
AACCAGGGCA ACGGCTGGGA CTGGACGCTC GACTACCTCA GTCGCGTGAT CGATGACGCG
CTGCCCGCGC AGGAAAGCGC GGACGAGTTC GCCGAAGCGA TGAACGGCTA CGCCACCATG
GCCGGCACGC TCGGCCGACG GCTGGCCGAG TTGCATGCAG TGCTCGCGCG TCCCACCGAC
GATCCCGCCT TTGCCCCGCG GCCGGCTACC GATGCTGAAA CGCGGCAGTG GGCCGAGCAG
GCCATGGCGG CTATCACGCA TGCACTGGCA TTGCTGGAAA AGCGCGCGCA GAACGACCCG
AAATCCGCAA GCAAGCGCTT CATGGCCGAC GTCGATACGC TGCTGAAGGC GCGCGACGCC
CTGCCCGCAC TGGTCAACCG GCTTGCCGCA GCCGCGCCCG GCAGCCTGCA GACACGATTC
CACGGCGACT TCCACCTGGG CCAGGTGCTG ATTGCGCAGA ACGACACCTA CCTGGTGGAT
TTCGAAGGCG AGCCGGGTCA GCCACTCGAC TGGCGCCGGC GCAAAACCTC GCCACTGCGC
GATGTTGCGG GGCTGCTGCG TTCGATCGAC TACGCCGCTG CGACCGTTGG CACGGACCGG
CAGGAACGCA CCCACGCGGA GTTGCCGCCC GCGCTGGCGG AGCGCCGCGG CGGCTTGCTC
GAACGCTTCC GCGAAACCGC CAGCGACGCC TTCCTGGGCT GCTACCGGCG TCATATGGAG
GCCTCCGGCA CGCCGTGGGC CGACAACGCG CAGTTTCAGC CGCTACTCGA TCTGTTCCTG
CTGGAACGCG CTGCGTACGA AGTCGAATAT GAAGCGGCCA ATCGCGTCGC CTGGATCGAC
CTTCCGGCCA GCGGGCTCGC GCGCATGGTG CGCAAGCTCA TGGCCGGAAA CCTGGAGGCG
CAATGA
 
Protein sequence
MKRLTEPANA LLLNADPLWY KDAVVYQLHI KSFYDANGDG VGDFAGLLAK LDYLVDLGID 
TIWLLPFYPS PRRDDGYDIA DYRNVHPDYG TLAEARRFVG AAHARGIRVI TELVINHTSD
QHPWFQRARK AKPGSAARRY YVWADNDQAY AGTRIIFCDT EKSNWSWDPV AGAYFWHRFY
SHQPDLNFDN PQVMNEVLSV MRFWLDIGVD GLRLDAVPYL VEREGTTNEN LPETHTAIRH
IRSHLDSHYQ GRVLLAEANM WPEDAQQYFG RSSTGDKGDE CHMAFHFPLM PRMYMAIARE
DRFPITDIMR QTPELPTDCQ WAIFLRNHDE LTLEMVTSSE RDYLWEVYAS DRRARINLGI
RRRLAPLMER DRRRIELMNS LLFSMPGTPV IYYGDEIGMG DNIHLGDRDG VRTPMQWSPD
RNGGFSHADP ERLVLPPLQG PLYGYEAVNV EAQARDPHSL LNWMRRMLAL RRKHRAFGRG
TLRFLFPGNR KILAYLREYE GEHILCVANL SRAPQAVELD LSAFNGRVPV EMMGATPFPA
IGTLTYLLTL PPYGFYWFVL SEDAHPPAWH VSAPEQMPDQ ITLVLQNKGR PELTEAARRM
LNDEVLPPYI RRRRWFGAKD DSIQRATLAY MAPFTKGTTG EEIYLGEVEV RLSGGRTERY
QLPLGVLWDR ESADSVSQLA HGLSMARVRQ GSRVGLATDG FVLEPFAREV IRALRADAEL
QGPQETIRFR SEPGLSAVQP EQEEIQWMSA EQSNSSLAYN NTAVLKLVRR LSGGTHPEVE
MTRYLTAQGY PHSPPLLGEV VRTGADGVPH TLMMVQGYIL NQGNGWDWTL DYLSRVIDDA
LPAQESADEF AEAMNGYATM AGTLGRRLAE LHAVLARPTD DPAFAPRPAT DAETRQWAEQ
AMAAITHALA LLEKRAQNDP KSASKRFMAD VDTLLKARDA LPALVNRLAA AAPGSLQTRF
HGDFHLGQVL IAQNDTYLVD FEGEPGQPLD WRRRKTSPLR DVAGLLRSID YAAATVGTDR
QERTHAELPP ALAERRGGLL ERFRETASDA FLGCYRRHME ASGTPWADNA QFQPLLDLFL
LERAAYEVEY EAANRVAWID LPASGLARMV RKLMAGNLEA Q