| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B4227 |
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| Symbol | |
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| ID | 3612657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007348 |
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| Strand | + |
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| Start bp | 865149 |
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| End bp | 868571 |
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| Gene Length | 3423 bp |
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| Protein Length | 1140 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637693659 |
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| Product | Alpha amylase, catalytic region |
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| Protein accession | YP_298424 |
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| Protein GI | 73538057 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.316311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCAG TCCAATTGTG TACTGCCTGG GGATACGGGG CATGCAGGCC CAACCAGCCA
AGGGAATACT ACGTGCGGAT CTGCCAGATC ACTATCGACC GAACTTCCAA CCAGCCCGAC
ACGCAGCACG ATGCACTGCG GCGTGTCGCC GCGCTGGGCT TTGACCACGT CCTGCTTTCC
GGCCGGCTCG CCGTTGTGCC GGCCAACCGG GACGCCCTGC CTGGGTTGTC AGCGCTGTGC
GCGCTCTGCG CCCGGCACGG CCTTACGCCA CTGCTCGACG TTTCGCTGGA CCGCTATCAG
GACAACGGCG CCGCCATGAT GGATCCCGCG TGGATCGATC ACACCGCGCC CGCCTTCGCC
CCGCACGATA CCGACAATCA CCTGCCCGGC GCGCGACTGC GCTGGCACGG GTCAGACGTG
GCTACCGCTC TAGTCGATTG GTGGGCCACG CAGTTGCGTG CGGCAATGGC AGCAGGAGTT
GCCGGCTTCT GCCTGCGCGC GCCAGCGCGC GTGCCTGGAC GCCACTGGGC CGCACTGACC
GGGGCGTTGC GTGGCGACGC CGGGACACAG CAGGCCAGGC GGCCTCTCTT CCTGGCCTGG
ACACCGGGGC TGACTCCGGC GCAACTGGAA GGCCTGTTGC CGGGGCAGTT CGATGGCGCG
TTCTGTTCCC TGCCGTGGTG GGACTATCGC AGCGCGTGGC TGACCGAGGA AATCGCGCGA
CTGCGGCCTT TCGGGCGCGT GCTGGCAGCG CCAGCACAGT CCCCAGCGAG CCAGGATGCC
CTGTCCGCAC GCCGTGCGTT GTGGACGGCG GCCGCCATTG GCGACGGCCT GCTGGTGCCG
GCCGGCTTCG AAACCGGCGG CACGCAGGCG CACGATCCGC TGGCGGACGA CGGTGGCGCG
CAGGATGGCG CGCCGTATGA CATCACCCAT GAAGTGCTGC AGGCCAATGC CTGGCTTTCC
GCACGCGCGC TGGTGCCTGC GGTGTCGGTA CGGCTGCTGA GCGGCCCCGA CGCGCCGCTC
ACCGTGCTCG CCCGCTTGCA GGCACAGGAT GGCCTTGATG GCGCGGCACT CCCCGAATCG
GCGCTGACCG TGGTCGTCAA CCCCGACACG CAGGAGCCGG GCACGCTTGG CGTCGACCGC
GTGCTGTCCA CGCTGCCGCG CGCTACGGCA AGCCTCGAAG CATCCGACGG CGGCCCGGGC
GGCAGCGTCG ACGCCGATAC GATCCTCGAC GCGCTGGCCG ACATCACGCT GGCCCCTGCC
GATATCCGCC TGTATCGCGC CATACCCTCG CCGTTGCGAC CGGTGGTGCG CGCACCGCAG
CCCGGCGAAA CGATCACGGC CAGCGGCCTC GGTAGCGTGG TGGCCGCGCT GGCGTCGCCG
CGCATTGCGA TAGAAGCTGT CGAGCCCGCC TGCGATGCCG GGCGTTTTGC AGTGCGCCGC
GTGGTCGGCG AACGGGTCGA GGTCAGCGCC GATATCTGGA TGGACGGCCA CGACAAGCTG
GCAGCCGCCG TCCTGTGGCG TGCGCCCGGT GAGGAAACGT GGCACGAAGC GCCAATGCGG
CTGGTGGTCA ACGACCGCTG GACCGGCAGC TTCCCGCTTG TCGCGCTGGG CCGCCACGAG
TTCACGGTCG AGGCCTGGCG CGATGCCTTT GCGAGCTGGC TCGACGAAAT CGGCAAGAAG
CGCGCGGCAG GCGTAGACAT TTCGCTGGAA ATCGAAGAAG GCGCCCGGAT CGTGGCCGAT
GCGCTGATGC CCGCGAAGGG CGATGCCCCG CCGCCGGACA GCGATCTCGC GGCGCTGGTC
GATGAACTGA CCGCCAGTGC CGGCGACGAC GCCGCACGCC TCGAGATCCT GCTGTCGCCG
CGCACTGCCG CGGTCATGCA GGCCGCCATG CAGAAACCAG AGGGACGCCC GTTCGCGAGC
CGGCATCCGG TGCCGCTGCC GGTGGAAGCG GAACGGCTGG CCAGCCGCTT CGCGAGCTGG
TATGAACTGT TCCCGCGCTC GGCAAGCGAT GACGATCGCC GCCATGGCAC CTTCGACGAC
GTGATCGCGC GCTTGCCCGC CATCCGCGCG ATGGGCTTCG ATGTGCTGTA CTTCCCGCCG
ATCCACCCGA TCGGCAAGAC GCACCGCAAG GGCCGCAACA ATAGCCTGCG CGCCGGCCCT
GAGGAACCCG GCAGCCCCTA TGCCATCGGG GCCGAAGACG GCGGACACGA TGCGCTGCAC
TCGCAGCTCG GCACCTTCGA AGATTTCCGG CGGCTGGGGC GCGCGGCGGC AGCGGCGGGT
CTGGAGCTGG CGCTGGATTT CGCGATCCAG TGCTCACCTG ACCATCCGTG GCTCAGGCAG
CATCCCGAGT GGTTCACGCG GCGGCCCGAT GGCTCGCTGC GCTACGCCGA AAACCCGCCC
AAGAAGTACG AGGACATCGT CAATGTCGAC TTCTACGCGG CCGCGCCAGC CGCCGCGGCA
CTGTGGCAGG CTCTGCGCGA CGTGGTGATG TTCTGGGTCG AGCATGGCGT GCGCATCTTC
CGCGTGGACA ATCCGCACAC CAAGCCCTTG CCGTTCTGGG AATGGATGAT TGCCGACGTG
CGCGCACGGC ACCCCGACAC CATCTTCCTG GCCGAAGCGT TCACGCGCCC GAAGATGATG
GCGCGGCTGG CCAAGCTCGG CTTCAGCCAG TCATACACGT ACTTCACGTG GCGCAATACG
CGCGCCGAAC TGACCGAGTA CATGACGGAG CTCACGCAGG GGCCGCTGCG CGAGTTCTTC
CGCCCGCATT TCTTCGTCAA CACACCCGAC ATCAACCCGT ACTTCCTGCA TCGTGGCGGA
CGTCCGGCGT TCCTGATCCG CGCGGCGCTG GCCACGCTGT TGTCCGGCCT GTGGGGCATG
TACAGCGGGT TCGAGCTGTG CGAGTCCGCG CCTCTGGTGC TCGACGGCAA GGTGCGCGAG
GAATATCTCG ACTCCGAGAA GTACCAGATC CGTGCCCGCA ACTGGCACCA GCCCGGCAAC
ATCGTGGCGG AAATCACGCG GCTGAACCAG ATCCGGCTCG GCCATCCGGC ACTCCAAAGC
CACCTGGGCC TGCGCATCTA TCCCGCGGGC AACGACGCGG TGCTTTACTT CGCGCGCTTC
GTGCCCGGCA CGGAATCCAC ATTCGGCGAC GACGTGCTGC TCGCGGCGAT CAGCATGGAC
CCGCACGCGC CGCAGGAAGC CACGGTGGAA ATCCCGCTAT GGGAATGGGG CCTCCCGGAT
CACGGCAGCG TTGCCGTGCA GGACCTGATG GACGAACACC GCTTCGCATG GCATGGCAAG
CGCCAGCGCA TCCGCCTCGA CCCGGCGCGG CTGCCGTTTG CGCTGTGGCA CATCACCCCA
ATCGGCAAGC CGGTACAGCG CAATGCCAGG CCTCCGGCCT CCGCCGATCC GCACGGCGCA
TGA
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| Protein sequence | MASVQLCTAW GYGACRPNQP REYYVRICQI TIDRTSNQPD TQHDALRRVA ALGFDHVLLS
GRLAVVPANR DALPGLSALC ALCARHGLTP LLDVSLDRYQ DNGAAMMDPA WIDHTAPAFA
PHDTDNHLPG ARLRWHGSDV ATALVDWWAT QLRAAMAAGV AGFCLRAPAR VPGRHWAALT
GALRGDAGTQ QARRPLFLAW TPGLTPAQLE GLLPGQFDGA FCSLPWWDYR SAWLTEEIAR
LRPFGRVLAA PAQSPASQDA LSARRALWTA AAIGDGLLVP AGFETGGTQA HDPLADDGGA
QDGAPYDITH EVLQANAWLS ARALVPAVSV RLLSGPDAPL TVLARLQAQD GLDGAALPES
ALTVVVNPDT QEPGTLGVDR VLSTLPRATA SLEASDGGPG GSVDADTILD ALADITLAPA
DIRLYRAIPS PLRPVVRAPQ PGETITASGL GSVVAALASP RIAIEAVEPA CDAGRFAVRR
VVGERVEVSA DIWMDGHDKL AAAVLWRAPG EETWHEAPMR LVVNDRWTGS FPLVALGRHE
FTVEAWRDAF ASWLDEIGKK RAAGVDISLE IEEGARIVAD ALMPAKGDAP PPDSDLAALV
DELTASAGDD AARLEILLSP RTAAVMQAAM QKPEGRPFAS RHPVPLPVEA ERLASRFASW
YELFPRSASD DDRRHGTFDD VIARLPAIRA MGFDVLYFPP IHPIGKTHRK GRNNSLRAGP
EEPGSPYAIG AEDGGHDALH SQLGTFEDFR RLGRAAAAAG LELALDFAIQ CSPDHPWLRQ
HPEWFTRRPD GSLRYAENPP KKYEDIVNVD FYAAAPAAAA LWQALRDVVM FWVEHGVRIF
RVDNPHTKPL PFWEWMIADV RARHPDTIFL AEAFTRPKMM ARLAKLGFSQ SYTYFTWRNT
RAELTEYMTE LTQGPLREFF RPHFFVNTPD INPYFLHRGG RPAFLIRAAL ATLLSGLWGM
YSGFELCESA PLVLDGKVRE EYLDSEKYQI RARNWHQPGN IVAEITRLNQ IRLGHPALQS
HLGLRIYPAG NDAVLYFARF VPGTESTFGD DVLLAAISMD PHAPQEATVE IPLWEWGLPD
HGSVAVQDLM DEHRFAWHGK RQRIRLDPAR LPFALWHITP IGKPVQRNAR PPASADPHGA
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