| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B4155 |
|---|
| Symbol | |
|---|
| ID | 3613548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | + |
|---|
| Start bp | 794798 |
|---|
| End bp | 796552 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637693588 |
|---|
| Product | long-chain-fatty-acid--CoA ligase |
|---|
| Protein accession | YP_298353 |
|---|
| Protein GI | 73537986 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGA CTCCCTACCT GCCCGGCGCC TGCGACGCTG TGGCCTACCC AAGCGGAACG
TTGTCCGTGG ACAAATCCGT GACGCTCGGC CCGGTGCCTT ATGACTTTCA TATGCCGGAA
ACCACGCTGT TCGAGAACCT TGAGATCTCC GCCCGGCGCT TCCCCGGCAA GACGGCCATC
CAGTTCTACG GCAATGCGAT TTCGTACACG GCGCTGCTCG ATGAAGTCAA GCGGCTCGCC
GGCTATCTGC AGCATGTCTG CGGCGTCGGC CAGGGTGACC GCGTGGTGCT GTTCAGCCAG
AACAGCCCGC AGTTCATCGC GGCCTACTTC GCGATCCTGC GTGCCGACGC CGTGGTGGTG
CCGGCGAACG CCATGCTGCT GGAGGATGAG CTGCGCCATA TCGTCACCGA CAGCGGTGCG
GTGGCTGCAT TTGCCGCCAG CGAACTGCTC GATCAGATCG CTCCGCTGGT CGGTACGACG
CCGCTGCGGC ACGTCATCGT CCACAGCTAT GGCGATGCGC TGACCGACGC GGATCTGGCG
GGGGGCAGCC TGGCGATTCC CGACTGGGCC AGGCAGCGTG CGGGAGATGC CGCGCTGCCG
CCTGGCGCCG CCCAGTGGCT GAGCGCCGTG GCGAAAGCAC ACCGCCCGGG GCCGCACCGC
AGCACACCGG ATGACCTTTG CATGCTGCCC TATACGTCCG GCACGACGGG CGCGCCCAAG
GCCTGCATGC ACACGCATCG CACCGTCATG GCGTCGGTGG CAGGCTCGCA GCTGTGGCGC
CGCTCGCACG CCGAGTCGAA CTTCCTGGCA GTGGCACCGA TGTTCCACCT GCTGGGCCTG
CAGAACGGCA TCAACGGGCC GGTCTACGTC GGCGGCACCA TCGTGCTGTT GCCGCGCTGG
GACCGCCGCA CCGCGGCGGA ACTGATCTCG CGCCATCGCG TGACCTTCTG GGCGGCGCCG
CCGCCGATGC TGGTCGAATT CTTCGCCCAG CCCGGCATCG AGTCGTTCGA CCTGAGCAGC
CTGAGTTGCG TCGTGGGCGG CGGCGCAGCC ATTCCCGAAG GCACGGCGCA GCTCATGAAG
GAACGCTACG GGCTGACATT CGTCGAGGGC TATGGCCTGA CGGAGACAGC ATCGTTCATC
ATTGCGAACC CGCTAGCGGC ACCGCGCAAC TGCCATCTCG GCGTGCAGAC CTATGGCGTG
GATGCGCGCG TGATCGATCC CGCCACGCTG GAAGAGGTGC CCGTCGGCGA CGTCGGCGAG
ATCGCCGTGC ATGGCGCGCA AGTCATGCTG GGCTACTGGA ACAAGCCCGA AGCCAACGCC
GAGAGTTTTA TTGTCATCGA CGGCAAGCGG TTCTTCCGTA CTGGGGACCT CGCCAGCGTC
GATGCCGATG GCTACTTTGT CATGCGCGAC CGGCTCAAGC GCATGGTCAA TGCATCGGGG
TACAAGGTGT GGCCGGCGGA AGTCGAAGCC ATCCTGCATA CCCATCCGGC GATCCTCGAG
TCCTGCGTGA TCGCGGCGCG CGATCCACAT CGCGGTGAGA CGGTGAAGGC TGTTATCGTG
CTGCGGCCGG ACGCCCCCGC TCTCGGTGAA AACGAACTAC TAGCCTGGTG CCGCGGCAAT
ATGGCGACGT ACAAGGCGCC GCGCATCGTG AAGATCGTCG AACGGCTGCC GCGCTCGGCA
ACGGGGAAGA TTGCGTGGCG GGAGTTGCAG GAGCAGGAAA TGCTGGGCGG GCCCTTGCCG
AACTTGAAGG CGTAG
|
|---|
| Protein sequence | MTMTPYLPGA CDAVAYPSGT LSVDKSVTLG PVPYDFHMPE TTLFENLEIS ARRFPGKTAI
QFYGNAISYT ALLDEVKRLA GYLQHVCGVG QGDRVVLFSQ NSPQFIAAYF AILRADAVVV
PANAMLLEDE LRHIVTDSGA VAAFAASELL DQIAPLVGTT PLRHVIVHSY GDALTDADLA
GGSLAIPDWA RQRAGDAALP PGAAQWLSAV AKAHRPGPHR STPDDLCMLP YTSGTTGAPK
ACMHTHRTVM ASVAGSQLWR RSHAESNFLA VAPMFHLLGL QNGINGPVYV GGTIVLLPRW
DRRTAAELIS RHRVTFWAAP PPMLVEFFAQ PGIESFDLSS LSCVVGGGAA IPEGTAQLMK
ERYGLTFVEG YGLTETASFI IANPLAAPRN CHLGVQTYGV DARVIDPATL EEVPVGDVGE
IAVHGAQVML GYWNKPEANA ESFIVIDGKR FFRTGDLASV DADGYFVMRD RLKRMVNASG
YKVWPAEVEA ILHTHPAILE SCVIAARDPH RGETVKAVIV LRPDAPALGE NELLAWCRGN
MATYKAPRIV KIVERLPRSA TGKIAWRELQ EQEMLGGPLP NLKA
|
|---|
| |