Gene Reut_B4020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B4020 
Symbol 
ID3614564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp659869 
End bp661332 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content70% 
IMG OID637693455 
ProductN-acyl-D-amino-acid deacylase 
Protein accessionYP_298220 
Protein GI73537853 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3653] N-acyl-D-aspartate/D-glutamate deacylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACACC TGTTTGATAC CCTGATCCGC TGCGTCATGC TGATCGACGG CTCGGGCGCC 
GCGGCGCGCA TGGCCGACGT GGCGCTGCGC GATGGCCGCA TCGCATCCAT CGACGACGCC
GGCGCCATCG ACGCCGACTC CGCCGCGCAC GTGGTCGAAG GCCACGGGCT GGTGCTCTCC
CCCGGCTTCA TCGACGTGCA CACGCACGAC GACACCAACG TGGTCCGCCA GCCAGAGATG
ACGCCCAAGC TGTCGCAGGG CGTGACTACG GTGATCGTCG GCAACTGCGG CATCAGCGCC
GCGCCAGTGG TGCTCTCAGG CGATCCGCCC GATCCGATGA ACCTGCTCGG GCATGCGGAT
GCGTTCCGCT ACCCGGATTT CCGCTCCTAC GTTCAAGCCG TCGACGCTGC CCAGCCATCC
GTCAACGTCG CGGCACTCGT GGGACATACC GCACTGCGCA GCAACCACAT GGACCGGTTC
GACCGCGCCG CCACGCCGGC CGAAATCGCC GCCATGCGCG CGCAGCTCGA AGAGGCGCTG
CAGCACGGCG CGCTGGGCCT GTCCACCGGG CTGGCCTACG CGAATGCGTT CAGCGCGCCG
ACGGAGGAAG TGCTGGCGCT GGCCGAGCCC CTCGCGCATG CGGGCGCGCT CTACGCCACG
CACCTGCGCA GCGAATTTGC GGAGATCCTC GACGCGATGG ACGAGGCCTT CCGCATCGGC
CGCCATGCGC GCGTGCCGGT CGTGATCTCG CACCTGAAAT GCGCCGGCGT CCCCAACTGG
GGCCGCAGCA CCGAAGTGCT TGACGCGCTC GACGCCGCGC AGCGCTGGCA ACCGGTCGGC
TGCGACTGCT ACCCGTACAC CGCGAGTTCC TCCACGCTGG ACCTCAAGCA GGTCACCAGC
GACTTCGACA TCATGGTGAC GTGGTCCGAA GGCGCGCCCG AGATGGGCGG CCGCCTGTTG
GCCGAAATCG CCGCCGAATG GCAGGTCGAC CTGCACGAGG CCGCCCGGCG GCTGATGCCG
GCCGGCGCCG TGTACCACTG CATGGAAGAC GCCGACGTCG ACCGCATTCT GAGCCACCCC
GCCACCGTGG TCGGCTCCGA CGGCCTGCCC AACGACCCGC TGCCGCACCC GCGCCTGTGG
GGCGCGTTCC CGCGCGTGCT CGGCCACTAT GCGCGCGACC GTGAGCTGTT CCCGCTCGCC
GTGGCCGTCA ACAAGATGAC CGGCATGTCG GCCGAGCGCT TCGGCCTGAC CGAGCGCGGC
TTCGTGCGCG AAGGCTATTG GGCCGACCTG GTGCTGTTCG ATGCCAACAC CATTCGTGAC
GCGGCCAGCT TCACCGATCC GATGCAACCG GCCGAAGGTA TTGCCGCGGT CTGGGTCAAC
GGCGAGCTGT CGTGGCAGCA GCGACAGCCC ACCGGCGTGC GCGCCGGCCG GTTCCTGCCG
CGCGGCGCCC AGCCCGCGGC GTGA
 
Protein sequence
MPHLFDTLIR CVMLIDGSGA AARMADVALR DGRIASIDDA GAIDADSAAH VVEGHGLVLS 
PGFIDVHTHD DTNVVRQPEM TPKLSQGVTT VIVGNCGISA APVVLSGDPP DPMNLLGHAD
AFRYPDFRSY VQAVDAAQPS VNVAALVGHT ALRSNHMDRF DRAATPAEIA AMRAQLEEAL
QHGALGLSTG LAYANAFSAP TEEVLALAEP LAHAGALYAT HLRSEFAEIL DAMDEAFRIG
RHARVPVVIS HLKCAGVPNW GRSTEVLDAL DAAQRWQPVG CDCYPYTASS STLDLKQVTS
DFDIMVTWSE GAPEMGGRLL AEIAAEWQVD LHEAARRLMP AGAVYHCMED ADVDRILSHP
ATVVGSDGLP NDPLPHPRLW GAFPRVLGHY ARDRELFPLA VAVNKMTGMS AERFGLTERG
FVREGYWADL VLFDANTIRD AASFTDPMQP AEGIAAVWVN GELSWQQRQP TGVRAGRFLP
RGAQPAA