| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B3994 |
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| Symbol | |
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| ID | 3613676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007348 |
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| Strand | - |
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| Start bp | 633431 |
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| End bp | 634324 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637693428 |
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| Product | GGDEF |
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| Protein accession | YP_298194 |
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| Protein GI | 73537827 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000430397 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCCGA CAGAATTCAC TAATCGCTAT GTGCCAACGC TGGAGCCGCT GGAACGACTG
CGCAGCGAGT TCCTCAACGA GGTGATCGCG CATTTTGAGG CGGACCGCCA GCATGCGCTG
CGCGTGCTGG TGACGGCTGG CAGCGCGACG GCGCTGATCC TGCTGGTGCT TGGCTACGTG
CTGGTGTTTG CGCAGCGTTC CGTGTTCCTG CCGTTGCTGG ATGCGCGCGA TGCGGTCATC
GCGCTGGCCG AGGGCCGCAG CCGCCCGAGC TTCACCCTCC CGGCCTCCGG TCGCGAGATG
CGGCGCCTGT TCGATGCGCT GGATATCCTG CGCCGCAAGC TCCGCGAGCG TGCATCGCTC
ACCGAGCAGC TGGAACACCA GGCCCGCACC GACAGCCTGA CCGGGCTGCT CAACCGGCGC
GCACTGGAAC GCATTGCCGC GCAGCCTGCC GATCCCGCCG GACCGTCGAC GACGAGCCTG
ATCCTCATGG ATGTGGATCG ATTCAAGCAG ATCAACGACC GGCACGGGCA CCCCGCCGGC
GATCAGGTAC TGCGCGCAGT GGCTGACCTG ATGCGCGATA TGGTGGACCC GGACCATGCG
CTGGCCCGCT TCGGCGGCGA GGAGTTTGCC GTACTGGTAC CAGGCGCAAG CGCTGACGAA
GCCGCGTCCC TTGCGCAGGC ATTATGCGCG GCGATCTGTG CCGAGCCGAT CCGCCTGGCC
GATGGCACCC GGCTGCCCGT GACCGCCAGT TTCGGCGTGG CCACCGGACT CAGCGGCGCC
CCGCACTGGC CTCGCCTGTT CGCTGCGGCC GATGCGGCGA TGTATCGCGC CAAGGCCGAG
GGCCGCAACT GCGTACGCCG CGCGGACGCA CCCGCCGAAG CCGTGGACCA CTGA
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| Protein sequence | MSPTEFTNRY VPTLEPLERL RSEFLNEVIA HFEADRQHAL RVLVTAGSAT ALILLVLGYV
LVFAQRSVFL PLLDARDAVI ALAEGRSRPS FTLPASGREM RRLFDALDIL RRKLRERASL
TEQLEHQART DSLTGLLNRR ALERIAAQPA DPAGPSTTSL ILMDVDRFKQ INDRHGHPAG
DQVLRAVADL MRDMVDPDHA LARFGGEEFA VLVPGASADE AASLAQALCA AICAEPIRLA
DGTRLPVTAS FGVATGLSGA PHWPRLFAAA DAAMYRAKAE GRNCVRRADA PAEAVDH
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