| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B3969 |
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| Symbol | |
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| ID | 3614236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007348 |
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| Strand | - |
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| Start bp | 605131 |
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| End bp | 606354 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637693402 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_298169 |
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| Protein GI | 73537802 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR00999] Membrane Fusion Protein cluster 2 (function with RND porters)
[TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0953607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATCA CCAAGACCCA ACGCAACGCG ATCGTTGCCA TCATCGGCGT CGGCGTGCTG
GCTGGCGCCG CACTACTCTT CAGCGGCCGT GGTCCCGGCG ACGACCACGA TCACGGCGAA
CACGCCGCGG AGCCGAGCAG CAACGAAAGT GGAAAGGAAG ACAAGGCCAC CGCATCGGCC
AACGACGCGC ATGCCGCCGA CCGCATCGCC ATGACGCCCG AGCAGATCCG CAGCGCCGGA
CTGGAATTGC ACACAGCCGG CCCCGGCCGC GTGCAGGCCG CCGTGCAGTT TCCCGGCGAA
ATCCGCTTCA ATGAAGACCG CACCGCCCAC GTCGTGCCGC GCGTGGTCGG CGTAGCCGAG
TCCGTGCCGG CCGTGCTGGG TCAGCGCGTG AAGAAGGGAG AACTGCTTGC GGTACTGGCC
AGTACACAGC TTTCGGATCA GCGCAGCGAA CTGCTGGCTG CGCAGAAGCG GCTGGAACTC
GCCCGCACGA CCTATACGCG CGAGAAGCGC CTGTGGGAGG ACAAGATCTC GGCCGAACAG
GATTTTCTGG CCGCGCGCAC CGCGCTGCAG GAAGCCGAGA TCGCGGTGCG GAACGCGACC
CAGAAGCTCA CCGCAATCGG CGCCCGGCCG GCGTCGGCCG GACTCAACAA GTTCGAGTTG
CGCGCGCCGT TCGACGGCAT CGTCGTCGAA AAGCACCTCG CACTCGGCGA AGCGGTAGCG
GCGGACACGA CCGTCTTTAC GATTTCCGAT CTCGCCACCG TGTGGGCTGA GTTCGTGATC
GCGCCGAAGG ACCTGAGCCA GGTACGGCTC GGCGAGAAAG TCAGCATCGC TTCCACCGCG
TTCGACGGCA CTGCCACGGG CACCGTGTCC TACGTGGGCT CGCTGCTCGG CCAGCAGACA
CGCACCGCGA CCGCGCGCGT AACGCTGTCG AACCCGGACA TGGCATGGCG CCCCGGCCTC
TTCGTTACGG TCAGCGTGGC CGGACAGGAA ACCGAAGTCC CCGTCGTCGT CGAAAGCGAA
GCCGTGCAGA CTGAAAGCAG CCAGCCAATG GTCTATGTCG AGGTCCCAGG CGGCTTTGAG
GCGCGCCCGG TCGCCACGGG ACGCAGCGAC GGCAAACGGA TCGAGATCGT CAAGGGGCTG
GAGCCAGGCG CACGCTACGT CGCACGCAAC AGTTTCGTGC TGAAGGCCGA GCAAGGCAAG
GCCGGCGCCG AGCACGCCCA CTGA
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| Protein sequence | MAITKTQRNA IVAIIGVGVL AGAALLFSGR GPGDDHDHGE HAAEPSSNES GKEDKATASA
NDAHAADRIA MTPEQIRSAG LELHTAGPGR VQAAVQFPGE IRFNEDRTAH VVPRVVGVAE
SVPAVLGQRV KKGELLAVLA STQLSDQRSE LLAAQKRLEL ARTTYTREKR LWEDKISAEQ
DFLAARTALQ EAEIAVRNAT QKLTAIGARP ASAGLNKFEL RAPFDGIVVE KHLALGEAVA
ADTTVFTISD LATVWAEFVI APKDLSQVRL GEKVSIASTA FDGTATGTVS YVGSLLGQQT
RTATARVTLS NPDMAWRPGL FVTVSVAGQE TEVPVVVESE AVQTESSQPM VYVEVPGGFE
ARPVATGRSD GKRIEIVKGL EPGARYVARN SFVLKAEQGK AGAEHAH
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