Gene Reut_B3928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B3928 
Symbol 
ID3614135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp559669 
End bp560538 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content69% 
IMG OID637693362 
Productpolysaccharide deacetylase 
Protein accessionYP_298129 
Protein GI73537762 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.284883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACGT CTGACATGAA CCCCACTGCG CAGCACGGGC CGATGCCGCC AGCGGCGCGC 
CGCTGGCGGC CCGGCATGCT GCTGTACGGC GCGGGCGTGG TGCACGCAGG TGCCGCCGCG
GCTGTGCTCG CCAATCCGGC CACACTCGGC CTGGCTGCAG CGAGTGTCGG CGCCACGCAT
GCGGCGCTTG CTACAGTCGG ACTGTGGCCG CGCAGCACGT GGCTCGGGCC GAACGTGCTG
CGGCTGCCAG CGAACGCCGG CAACAGCGTG GCGCTGACTT TCGATGACGG CCCGCACCCG
GACATGACCC CGCGCGTGCT CGACATGCTC GACCGTCATG GCGCGCGCGC CACGTTTTTC
TGCATTGGCG AGCGCGCGGC GCGATATCCC GATCTCGTAC GGGAGATCGC ACGCCGCGGG
CATACCGTGG AGAACCACAG CATGCATCAC CGGCTCGATT TTTCGCTGTT CGGCCCCTGG
CGCATGCGTC GCGAGATCCG CGCGGCCCAG CAGTTGCTGA CCGAGATCAC GGGACAGCCA
CCGCGCTATT TCCGCGCGCC GGCAGGACTG CGCAATCTGT TCCTCGAACC CGTGCTGTGC
GCGGAGGGAC TGCAGCTTGC CGCATGGACC CGGCGCGGCT ACGACACGCG CAACGGCGAC
CATGCCGCGC GCGTCGCGCA GCGCCTCATG CGAAACCTGG CCGCTGGCGA CATCCTGCTG
CTGCACGACG GCAATAGCGG TGTCGATACG GCCGGCAAAC CGCACTGCAC GACCGTGCTG
CCCAAACTGC TTGCAACAAT TACCGACGCG GGCCTGCGCT GCGTGACGCT GCGTGCCGGC
ATGGCGGCAT GGGACTTGCA TGCGGCTTGA
 
Protein sequence
MKTSDMNPTA QHGPMPPAAR RWRPGMLLYG AGVVHAGAAA AVLANPATLG LAAASVGATH 
AALATVGLWP RSTWLGPNVL RLPANAGNSV ALTFDDGPHP DMTPRVLDML DRHGARATFF
CIGERAARYP DLVREIARRG HTVENHSMHH RLDFSLFGPW RMRREIRAAQ QLLTEITGQP
PRYFRAPAGL RNLFLEPVLC AEGLQLAAWT RRGYDTRNGD HAARVAQRLM RNLAAGDILL
LHDGNSGVDT AGKPHCTTVL PKLLATITDA GLRCVTLRAG MAAWDLHAA