Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_B3890 |
Symbol | |
ID | 3612726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007348 |
Strand | - |
Start bp | 512503 |
End bp | 514236 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637693324 |
Product | helix-turn-helix, Fis-type |
Protein accession | YP_298091 |
Protein GI | 73537724 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.506447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCTCAT CGACAACACA AGGGCCGACC CCGCCCGCCC TCGGCGCGGT AATCCGGTCA CGCGAAGGGA AGCGGCTATC GGCGATAGGG GTCTGTGCTG ACCCCAGCAC TGCGGAAGCG GCGGAAGCTG CTTGTGCCGG AGCGGCGGAT CGCACGGCGG GTAGGCGGCT GTTTCCCGTG GAGGCTGGCG GTCACCGCTA CGTCGGCCTG TGTCTCGAGG ACGCAGCGCA GCAGATCATC CTGCTGCACC GCGCCGATAC GCACACCGTA CTGTTCGACT TCCTGGGCAC GGTGCCCTTT GCCAGCGCCA TCCTCAACCA TTTCCTGACC GACCCGTACC AGGCCATCAC CGTGGCTGAC CGGCAAGGCC GCATGCGGTT CATGAGCCCC GTCCACGAAA AATTCCTGGG CCTCGATACC GGCGAAGGCA TCGGTCGCCC GGCCGCCGAC GTCATCCCGA ATTCGCGGCT GGCGCAGGTA GTGGCCAGCG GCAAGGCCGA GATCGGGCAG CTTCAGCCGA TGAATGGCGT GACGCGCGTG GTCAACCGCA TTCCGATCCG CCAGGACGGC GAGGTAGTCG GCGCCATCGG CCAGATCATG TTCAAGGGCC CGGAAGACAT GGTCCGGATG CACGATGAAC TGTCCGAACT GCGCTCGCAG GTCGCGCGCT ACCAGCGCGA ACTGGACGGC CTGCGCGAGG GCCAGCCGCC GCTCGGGTTG ATCGGCGACA GCGCGCCGAT GCAGCGCCTG CGCCGCGAAA TCCAGACTGT TGCGCGGCTC GACGTGCCGG TGCTGATCCT CGGGGAAAGC GGCACCGGCA AGGAACTGGT TGCCAACGCC ATCCACCACG CGGGGCGCGA GCCCGTCAGC GAGCGGCCGC TGCTCAGCCT GAACCTGGCC GCGCTGCCCG CCACGCTCAT CGAGTCCGAA CTGTTCGGCC ATGCGCCCGG CGCGTTCACG GGCAGCCAGC GGCATGGGCG GGCCGGCAAG CTTGAGCTCG CAGCTGGCGG CACCGTGTTC CTCGACGAGG TCGCCGACAT CCCGATGGAG ATGCAGGTCA AGTTGTTGCG CGTGTTGGAG GACCACATGG TCGAACGACT CGGCAGCCGC CGGGCGCAGC ACGTGGACTT CCGGCTGATC TCCGCGACCA ATCGCGACAT TCCGGCGCTG ATCGATGCGG GTCGCTTCAG GCTGGACCTG TACTACCGCC TCAGCGGCGT GGTGCTGCGC ATTCCGGCGC TGCGACAGCG GCGCGAGGAT ATTCCCGCGC TGCTGCAGCA CTTCGTCAAT GCGTTCTGTG CGCGCAACGG CGTGCCGGTG CCGAAGGTCG ACCATGACGT CGCGCGGCAC CTTGCGGGCC AGCCGTGGCC CGGCAATGTG CGCCAGTTGC GCCAGCGTAT CGAGGAAGCG CTGGTGTTCT GCGATGGCCG CATGCTCAGG GCTACCGACT TTGCGCGTGG CGAATCGGCG CGTGGGCTCG TGGGCCTGGA AAGCGAGCCG GTCGTGCATC CACTGGCGCG GGCGTATTCG CATGAAGAGG TTGAAACGGA CAGCAGGGCA TCGAATGCGG CATTGCCGGT TAGTGAGCCT GCGGCGGGGA TGAGCGAGCT TGCCTATGCG GCAGTGGTCG ACGCGATTGC GCGTCATGGC GGCAACAAGA AGCGCGCCGC AGAACAACTG CGGATTTCGC GTTCGCATCT GTACAAGATA TTGGAGCGCG GGCCCGGCGG GTGA
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Protein sequence | MSSSTTQGPT PPALGAVIRS REGKRLSAIG VCADPSTAEA AEAACAGAAD RTAGRRLFPV EAGGHRYVGL CLEDAAQQII LLHRADTHTV LFDFLGTVPF ASAILNHFLT DPYQAITVAD RQGRMRFMSP VHEKFLGLDT GEGIGRPAAD VIPNSRLAQV VASGKAEIGQ LQPMNGVTRV VNRIPIRQDG EVVGAIGQIM FKGPEDMVRM HDELSELRSQ VARYQRELDG LREGQPPLGL IGDSAPMQRL RREIQTVARL DVPVLILGES GTGKELVANA IHHAGREPVS ERPLLSLNLA ALPATLIESE LFGHAPGAFT GSQRHGRAGK LELAAGGTVF LDEVADIPME MQVKLLRVLE DHMVERLGSR RAQHVDFRLI SATNRDIPAL IDAGRFRLDL YYRLSGVVLR IPALRQRRED IPALLQHFVN AFCARNGVPV PKVDHDVARH LAGQPWPGNV RQLRQRIEEA LVFCDGRMLR ATDFARGESA RGLVGLESEP VVHPLARAYS HEEVETDSRA SNAALPVSEP AAGMSELAYA AVVDAIARHG GNKKRAAEQL RISRSHLYKI LERGPGG
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