Gene Reut_B3887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B3887 
Symbol 
ID3612723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp509174 
End bp510415 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content65% 
IMG OID637693321 
ProductureA/short-chain amide ABC transporter 
Protein accessionYP_298088 
Protein GI73537721 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0891482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGAC ACCATTCGAT GTTCCGCAAG GCCGCCGGCA CGCTGGCCAT GGCCGCCGCG 
CTGGCCTGCG GCGCCGCGCA CGCCCAGCCA GCGGCTGGCA TCTCTGACGA CATGGTCAAG
ATCGGCATGC TGCTCGACAT GAGCGGCCTC TACGCCGATG TCACAGGCCG CGGCAGCGCC
ACGGCCGCGC AGATGGCCAT CGACGATTTC GGCGGCAAGG TGCTGGGCAA GAAGATCGAA
CTGGTGGTGG TCGATCACCA GAACAAGGCG GACATTGCCG CCAACAAGGC ACGCGAATGG
TTCGACACGG GACATGTCGA TGCCATCCTC GACGTGGCGG CCTCCGCGCC GGCGCTGGCC
GTGCTGGACG TGGCCAAGCA GAAGAACCAC ATCGTGGTGT TCTCGGGCCC GGGCAGCGAG
CGCATTACCA ACGACCTGTG CACGCCGGTG TCGGTGCATT ACGCGTACGA CACCTATGCG
CTCGCCAATA CGACCGCACG CGCCATGGTG CAGCGTGGTG GCAAGACCTG GTTCTTCCTG
ACCGCGGACT ACGCGTTCGG CCACACGCTG CAGGACTCAG CCACCGCGGT GATCAACGAA
GCCGGCGGCA AGGTACTGGG CGCCGCGCGC CATCCGATCG GCGCGAGCGA CTTTGCGTCC
TACCTGCTGC AGGCGCAGGC CAGCAAGGCG CAGGTCGTAG GGCTCGCCAA TGCGGGCGGG
GACACCGTCA ACGCGATCAA GGCCGCGTCG GAGTTCGGCC TGACACGCAA CGGCGCGCAG
CGCATGGCCG GCCTGCTGCT GTACATCAAC GACATCCACG CGATCGGCCT GAAGACGGCG
AGCGGGCTGG TGCTTACCGA GGCCTTCTAC TGGGACATGA ACGACGCCAC GCGTGCGTGG
TCGCGGCGCT ACTTCGAGAA GGTCAAGAAA ATGCCGAACA TGAGCCAGGC TGGCGCCTAC
TCGTCGGTCA TGCATTACCT CAAGGCCGTG CAGGCCGCAG GCACCGACGA AACCGCCGCG
GTGATGAAGA AGATGAAGTC CATGCCCATC AACGACTTCT TCGCCAAGAA CGGCCGCATC
CGCGAAGACG GCCGCATGAT CCACGACATG TACCTGTTCG AGGTGAAGAG CCCGGCGGAG
TCCAAGTATC CGTGGGACTA CTACAAGGTG CTCGCGACGG TGCCGGGCGA CCAGGCTTTC
ATGCCCGCGT CGAAGTCGCA ATGCCCGCTG CTCAAGCGCT GA
 
Protein sequence
MKRHHSMFRK AAGTLAMAAA LACGAAHAQP AAGISDDMVK IGMLLDMSGL YADVTGRGSA 
TAAQMAIDDF GGKVLGKKIE LVVVDHQNKA DIAANKAREW FDTGHVDAIL DVAASAPALA
VLDVAKQKNH IVVFSGPGSE RITNDLCTPV SVHYAYDTYA LANTTARAMV QRGGKTWFFL
TADYAFGHTL QDSATAVINE AGGKVLGAAR HPIGASDFAS YLLQAQASKA QVVGLANAGG
DTVNAIKAAS EFGLTRNGAQ RMAGLLLYIN DIHAIGLKTA SGLVLTEAFY WDMNDATRAW
SRRYFEKVKK MPNMSQAGAY SSVMHYLKAV QAAGTDETAA VMKKMKSMPI NDFFAKNGRI
REDGRMIHDM YLFEVKSPAE SKYPWDYYKV LATVPGDQAF MPASKSQCPL LKR