Gene Reut_B3794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B3794 
Symbol 
ID3613379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp396734 
End bp397300 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content67% 
IMG OID637693229 
Productsigma-70 region 2:sigma-70 region 4 
Protein accessionYP_297996 
Protein GI73537629 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.185514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGCTT ATCCGGGAGG GCTGGCGGTG AAGGACCTGT TGCAGCAAGT CGAGCCGATG 
ATCCCCGCGC TGCGGCGCTA TGCGCGCGCA CTGCTGCGAG ACGCAGCCGC CGCCGACGAT
CTCGTGCAGG ACTGCCTCGA GAAGGTCATC ACTTACTGGG ACAGCCGCCG CCACCACGGC
GACACGCGCA GCTGGGTGTT TGCGATCCTG CACAACCTGG CGATGACCAC GCTGCGCCGC
CACGCCGGCA CGTCGGGCCT GCATGTCGAC ATCGACGATG TGGCGGAATC CCTGAGCACC
CGCGCCACCC AGGAGGATGC CCTGCACTAC CAGGACCTCA TGAGCGCACT GGACGCGCTG
CCGGCCGAGC AGCGCAGCGT GCTGCTGCTG GTGTCGGTCG AAGACATGTC GTACGCGGAC
ACCGCGCGCG TGCTCGACAT CCCGATCGGC ACAGTGATGT CGCGCCTGTC GCGTGCACGG
GATAGGCTGT TGAGGATCAT GGAAAGCGGC GAGACGGCGA CGACAGCAGG ATCGCCCCGG
AAGGCGGCAT TGCGGAGGGT CAAATGA
 
Protein sequence
MDAYPGGLAV KDLLQQVEPM IPALRRYARA LLRDAAAADD LVQDCLEKVI TYWDSRRHHG 
DTRSWVFAIL HNLAMTTLRR HAGTSGLHVD IDDVAESLST RATQEDALHY QDLMSALDAL
PAEQRSVLLL VSVEDMSYAD TARVLDIPIG TVMSRLSRAR DRLLRIMESG ETATTAGSPR
KAALRRVK