| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B3654 |
|---|
| Symbol | |
|---|
| ID | 3613883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007348 |
|---|
| Strand | + |
|---|
| Start bp | 231549 |
|---|
| End bp | 232877 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637693089 |
|---|
| Product | diguanylate cyclase/phosphodiesterase |
|---|
| Protein accession | YP_297856 |
|---|
| Protein GI | 73537489 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGCCA AGTCGGGGGC GAAGGCGGCT GGCGCTTCGC CAGACGGGGA GACCGATCCG
CTGACCGGGG TCGGGAATCG CCTGGGATTC CTAAAACGGC TGGAGGCACG CCTGCATAGC
GAGGCAGTGC CCCGCTGCGC ATTGCTGCTG ATCGGCATTG ACGATTTCCG CGCCTTCAAC
GACATGCACG GCCATGCCGA GGGCGATCTG ATCCTGCAGG GCGTGGCACG CCGGCTGCGC
GATGCTTCCC CGCGCGATGC CGTGATCGGC CGTATCGGCA GCGACGAGTT CTCGGTGTTG
CTGCCGTCCA TTTCCGATCC GACCCTGGTG CGGCACGTCG GCGCCGCCAT CCTTTCCATG
CTGACCGCGC CGCACGAGCA CAGCGGGCGC CGCCACCACG TGCTCGCCAG CGTCGGCGCA
TGCGTGATGC CGGCGGCCGG CGATCTTGCG TCGGACGCGC TCGCGGCCGC CAGCCTGGCG
CTGGCCCGCG CCAAGCATGA CGGCGGACGC ACCATCCGGT TTTTCAAGCC GCAGATGCGG
CAGGACGTGA CCACGCGGCT GTCGCTGGTC CAGGCCCTGC ACGAAGCGTA TGCGCAGCGG
CAGTTCGAAC TGCACTACCA GCCTCAGGTC GATCTGCGCA CCGGCCATAT CCACGGAGCC
GAGGCGCTGC TGCGCTGGCG CCATCCGACC CGCGGCCTGC TCGCGCCGGC CAGTTTTATC
GATGCCCTGG CGGCCAGCAG CGTGGCCAGC GACGTCGGCA TGTGGCTGCT GCAGACCGCC
TGCGCGCAGG CGCGTGCCTG GTCGCTGACG CTGCCGCAGG CGCCGCGCGT GGCCATCAAC
CTGTTCGCGG CCCAACTGGC CGAAAGCCGG CTGGTGACCG AGGTGCGCCA CGTCCTGCGC
TCGCTCGAAC TGCCGCCGGC CGGCCTGGAG ATCGAGATCA CGGAGACCAT CGCTCTGCAG
CAGGGCGACG AGGTGTCCGA CCAGCTCCAG GCTCTGCGGC GCGACGGCGT GACCCTGACC
TGCGATGACT TTGGCACGGG CTACGCCTCG CTGAGCTTCC TCAAGTCGTT CCCGGTCGAT
CGGCTCAAGA TCGACCAGTC CTTCGTGCGC AACGTGACGC AAGACCCAGT GGACGCCGCC
ATCGTACGGT CCGTGATCAA CGTCGGGCAA AGCCTGCAGA TCGGCGTGGT GGCCGAGGGC
GTGGAAACGG TCGAGCAGCG AGACTTCCTG CTGGCCAATG GCTGTTGGGA GGCGCAGGGC
TACCTGTATG GGCGGCCGAT GCCAGCCGAG CGCCTTACGG AGCACTTGCG GGAGCAGTCT
GGGAATTGA
|
|---|
| Protein sequence | MVAKSGAKAA GASPDGETDP LTGVGNRLGF LKRLEARLHS EAVPRCALLL IGIDDFRAFN
DMHGHAEGDL ILQGVARRLR DASPRDAVIG RIGSDEFSVL LPSISDPTLV RHVGAAILSM
LTAPHEHSGR RHHVLASVGA CVMPAAGDLA SDALAAASLA LARAKHDGGR TIRFFKPQMR
QDVTTRLSLV QALHEAYAQR QFELHYQPQV DLRTGHIHGA EALLRWRHPT RGLLAPASFI
DALAASSVAS DVGMWLLQTA CAQARAWSLT LPQAPRVAIN LFAAQLAESR LVTEVRHVLR
SLELPPAGLE IEITETIALQ QGDEVSDQLQ ALRRDGVTLT CDDFGTGYAS LSFLKSFPVD
RLKIDQSFVR NVTQDPVDAA IVRSVINVGQ SLQIGVVAEG VETVEQRDFL LANGCWEAQG
YLYGRPMPAE RLTEHLREQS GN
|
|---|
| |