Gene Reut_B3617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B3617 
Symbol 
ID3613223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp186400 
End bp187998 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content65% 
IMG OID637693052 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_297819 
Protein GI73537452 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTCGA CGGCACAATC CGGGCATGGC AGCGGACAGG TTCTCCCGTT CCGCGAATCG 
CTGCTTGCCA TGTTGGGGGT GGCCTTTGTG TCGATGCTGG TGGCCCTTGA CCAGACCGTG
GTCGGTACGG CACTGCCAAC GGTTGTCGCC GAGCTCCAGG GCTTCGAGTA CTACGCGTGG
GTAGCGACGT CTTACCTGCT GCTGTCGGTG ATTACCGTGC CGATCTTCGG GCGCCTCGGC
GATTACTATG GCCGCAAGCC TTTCGTGCTG GCTTCCATCG TCGTGTTCTC GGTGGCGTCC
GCGCTGTGCG GCATGGCGAC GAGCATGCCC TTCCTCGTGG CTGCGCGCGG ACTGCAGGGA
ATCGGGGGCG GCATGCTGGT CGGCACGGCG TTCGCGTGCA TCCCAGATCT GTTTCCGGAT
TCGCACGTGA GGCTGCGCTG GCAGGTTCTG ATGAGTGCGG CGTTTGGCGT GGCGAATGCA
ATCGGGCCGT CGCTGGGCGG CATACTCACG GAGTGGTACG GCTGGCGCGC CGTGTTCTAT
GTCAACCTGC CGGTGGGGGT GCTGAGCCTG TGGTTCGTGT GGCGCTACCT GCCGCACCTG
CGCCAGCAAT CGCATTCCGG CCCGATCCGG GTCGACTGGC TGGGTGCCTT GCTGATCGGC
GTGGGGCTCG GCTGCATGCA GATGAGTGTC GAGCTGCTAC CGCAGCGTGG CGTCGATTGG
CTGACCGCAG GGCTGCTTGC CGTCGCTGTC GCGGCGCTGG TCGGGTTGTG GCAATGGGAA
CGCCGCTGTG CCAATCCGAT CCTGCCGCTG GACATGTTCC GCAACCCCGG CGTGGCGCCG
CTGCTCCAGC TCGCCGTGCT GGTCGGGTTC ACGATGTTTG CGGTGCTGAT CTATGCACCG
CTGCTGCTGC AGGGGGGCTT TGGCTATTCG CCGCGCGATG CTGGGCTGTT GGTAACGCCG
CTGGTGGTGT GCATCACGGT CGGCAGTATC GTGAACGGTC GCATCATCAC GCGCATCCGC
CGTCCTAACG CGATGTTGTT CGCCGGCTTT GGCATGCTGG CCGCCGGATG CCTGGCCCTG
TCTCAGGCCA CGCGCGGCAT GCCCCATTCG CTGCTGCTCG CGATCATGTT GGTTGCCGGT
TTCGGGCTTG GCTTCATCAT GCCAAACCTC ACGGTGTTTG CGCAGCAGAC AGTGGGCCGG
GAACATCTTG GTATCGCTAC CGCGATGCTG CAGTCGCTAC GGATGGTAGG GGGCATGATC
GGTACGGCGA TGGTCGGCAC GATGGTATCG CGCTCCTATA CCGCAGGTGT GGAGCAGTCG
CTTGCGGCCG TCAATGCGCA GGGCTGGCTC ACGCGCATGG CCGATCCGCA GGTGCTGATC
GATAAGGCCG CGCAGGCAGG ATTGCTGACC GAACTGCAGC AGGCAGGGCA CAATGGCGCC
TTGCTGCTGG AGCAGGCGCG TGTGTCCCTG GTGACTGCAA TTCATTTCGG GCTGGTAATT
GCCGCAGCGG CAGCGTTGAT AGGCCTGTGG CGCGCGCGGC GCGTGCCGCC GGTCAGGCTC
GTGCGAGCCG GCCAGCAGCC GGCCATGGCG GCTGACTAG
 
Protein sequence
MTSTAQSGHG SGQVLPFRES LLAMLGVAFV SMLVALDQTV VGTALPTVVA ELQGFEYYAW 
VATSYLLLSV ITVPIFGRLG DYYGRKPFVL ASIVVFSVAS ALCGMATSMP FLVAARGLQG
IGGGMLVGTA FACIPDLFPD SHVRLRWQVL MSAAFGVANA IGPSLGGILT EWYGWRAVFY
VNLPVGVLSL WFVWRYLPHL RQQSHSGPIR VDWLGALLIG VGLGCMQMSV ELLPQRGVDW
LTAGLLAVAV AALVGLWQWE RRCANPILPL DMFRNPGVAP LLQLAVLVGF TMFAVLIYAP
LLLQGGFGYS PRDAGLLVTP LVVCITVGSI VNGRIITRIR RPNAMLFAGF GMLAAGCLAL
SQATRGMPHS LLLAIMLVAG FGLGFIMPNL TVFAQQTVGR EHLGIATAML QSLRMVGGMI
GTAMVGTMVS RSYTAGVEQS LAAVNAQGWL TRMADPQVLI DKAAQAGLLT ELQQAGHNGA
LLLEQARVSL VTAIHFGLVI AAAAALIGLW RARRVPPVRL VRAGQQPAMA AD