Gene Reut_B3584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B3584 
Symbol 
ID3613166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp141433 
End bp142104 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content60% 
IMG OID637693014 
Productamino acid ABC transporter permease 
Protein accessionYP_297786 
Protein GI73537419 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.495139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGCA TCATGAGCCC TTTTGATCTG ATTATTCATG CCTCCCCGGT GCTCTTGCAG 
GGCGCCGCGA TCACCGTGAA GTTCGCCCTG GCCTCGATGA TCTTCGGCCT GTTGGTCGGG
ATCGTCGTTG CCATCATGGG AATCAGTGCC AGTCCTGTCC TCAGTGGCAT CGCACGCGCC
TATGTCAGCG TCATGCGGGG GACGCCGCTG CTTGTGCAGA TGTTTGTCGT CTACTACGGT
CTGCCCGATC TCGGCATCAA TCTCGAACCC ACTACTGCCG GCATCCTTAC TCTCACGGCC
AATGCCGGCG CTTACCTCTC GGAAAGCATG CGCGGCGCGA TCCTGGGTAT CAGCCGCGGG
CAATGGAGCG CGGCGCACAG TCTCGGGCTT AGTCACCTGC AGACACTGCG TTACATCGTC
TGCCCGCAGG CGCTGCGGCT GGCCGTACCG AGCCTCGGCA ATACGCTAAT CAGCCTGATC
AAGGACACCT CGCTGGTTTC CGTCATCACC GTAACCGAGT TGCTGAGATC GTCGCAGGAG
ATCATTGCCT CGACTTTCCA ACCGCTTCCG CTCTACCTGT CAGTAGCCGC CATTTACTGG
TTGCTGAGCA CAGGATTGTC GTGGGTGCAG CGGCGCATCG AGGCGCGGCT GACACTGCGC
GTGACACGCT GA
 
Protein sequence
MDRIMSPFDL IIHASPVLLQ GAAITVKFAL ASMIFGLLVG IVVAIMGISA SPVLSGIARA 
YVSVMRGTPL LVQMFVVYYG LPDLGINLEP TTAGILTLTA NAGAYLSESM RGAILGISRG
QWSAAHSLGL SHLQTLRYIV CPQALRLAVP SLGNTLISLI KDTSLVSVIT VTELLRSSQE
IIASTFQPLP LYLSVAAIYW LLSTGLSWVQ RRIEARLTLR VTR