Gene Reut_B3501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B3501 
Symbol 
ID3614884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp38172 
End bp39641 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content68% 
IMG OID637692931 
ProductOuter membrane efflux protein 
Protein accessionYP_297703 
Protein GI73537336 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAAT ATCGTCAGTT CGGTGCACCA ATCGGCGGGC ACGGTCGTTT ACCTTTGACT 
GTTGTCGAAC CCGAGCCAGA TCGAACCGTG CCTTTTCCTG TTTCAAGCGC TACTGCTGCC
GCCATCCTGG CGGTCGTGGC CGGCCTGACG GCCCCGTTGG CCCACGGGGC GAGCCAGCCG
CTGCCGCCCG ATGGGCCCTG CCTGCCGCCG CCCCCGAAGG CCACCCTGAC CCTGGCGCAG
GCGCGTCAGG ATGCTCTGCG CTGCAACCGC GACATCATTG CCGCGCGCCG CGGCGAGGAA
GCGAGCCAGG CGGATATCCA GATCGCGTCG CAGCGCCCGA ATCCCGTGTT GAGCGTTGGT
GTGCAGAACA TCAATCCGCA CGCCGGCGTC GGCTCCGGCA ACCTGCGCAG CAAGACCGTG
GATTCCACGT TCCGCATCGA CCAGCTGATC GAAACCGCGA ACAAGGGCAA CCTGCGCAAG
GACGCCGCGC AGAAGGCGAG CGTGGCGGCC GGCGAGGCCG TGCAGGCCGT GGTGGCCCAG
CAGACCGGCG CCGTCGAGCA GGCGTTCTAC GATGCCGTGG TAAGCCAGGA GCGCGTCCAG
GTGCTGAGCG AGACCGTAGC GCTCTATACC CGCACGCAGC AGGCTAACGA GACTCGCCTG
AAGGCCGGCG ACGTGTCGCG CGCCGACGTG ACCAAGCTCC AGCTCGACAA CCTGCGTGCG
CAGAACGACA TGCGCCAGGC CATGGCCGAC CATATGCGCG ACAAGGCGCA ACTGGCCCAG
GCCATGGGGG TGCCGGGCAC GCTGGCCGAC AACCGCCTAG TGGCGGACTG GCCGTCGCTC
GACGAGCCGA CCCCGCCGGT CGATCTCGAA ATTGCGCAGC GCCGCCCCGA CGTGACCGCG
GCCGAGGCCC GTCTGGCTGC CGCCGCCTCG GCGCGTGACC TTGCCCGTGC CGGCCGCGTG
CCCGATGTGA CCGTGGGTGC GCAATACGAG CACTACCCGA TTTCCGAAAC TAATACGAAC
GGCAGCGGCA ACAGCTACGG CGTCTTTGTC TCGATTCCGC TGTTCGTGCG CCACAGCAAT
GGCGGCGAAG CGCGCCGCGC CGAGGTCGAC TATTACGCCG CGCTCGACGA TCGCAACCGC
GTGCTGCTCG AGGCGCAGAA TGAGGTCGAA CGCTTGCGCA ACCAGCTCGA AGCCGCACGC
CTGTCGCTGA GGCAGATGCG CGAATCCGTC GTGCCCGCCG CCGAATCGGT AGCAGGAAGC
GCCGAATTTG CCTATACGAA GGGCGCAACC GGCGTGCTCG ACTTGCTCGA TGCACGCCGC
GCGCTGCGTC AGACCCGGCT GGACGCCACC AATGCCCAGG GCGACTACGC CAAGGCCCTG
TCGGCTTACC GCACGGCGTT GCAGTCCACC ACCACTCCCG TCAGCTCCAT CCCGAATTCC
CAGGTCCGTA CCGATGCGCC GCGTCCCTAA
 
Protein sequence
MTKYRQFGAP IGGHGRLPLT VVEPEPDRTV PFPVSSATAA AILAVVAGLT APLAHGASQP 
LPPDGPCLPP PPKATLTLAQ ARQDALRCNR DIIAARRGEE ASQADIQIAS QRPNPVLSVG
VQNINPHAGV GSGNLRSKTV DSTFRIDQLI ETANKGNLRK DAAQKASVAA GEAVQAVVAQ
QTGAVEQAFY DAVVSQERVQ VLSETVALYT RTQQANETRL KAGDVSRADV TKLQLDNLRA
QNDMRQAMAD HMRDKAQLAQ AMGVPGTLAD NRLVADWPSL DEPTPPVDLE IAQRRPDVTA
AEARLAAAAS ARDLARAGRV PDVTVGAQYE HYPISETNTN GSGNSYGVFV SIPLFVRHSN
GGEARRAEVD YYAALDDRNR VLLEAQNEVE RLRNQLEAAR LSLRQMRESV VPAAESVAGS
AEFAYTKGAT GVLDLLDARR ALRQTRLDAT NAQGDYAKAL SAYRTALQST TTPVSSIPNS
QVRTDAPRP