| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A3460 |
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| Symbol | |
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| ID | 3611554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | - |
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| Start bp | 3803317 |
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| End bp | 3804984 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637692887 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_297662 |
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| Protein GI | 73543142 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.03518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCA AACGCACCAT CCTCTGGGTC ATCTTCTCGA TGTCCCTCGT GCTGCTCTAT
GACAACTGGC AGCGCGCCAA CGGCCACGCG TCGATGTTCT TCCCGAGCGC GACGCAGCAG
CAGGCCGCTT CGGCGCCCGC CGCCAGCGCC GCTCAGGGCG ATGTGCCCAA GGCCAACGCG
ACCGCAGGCG CCGCCGCTCC GGCAGCCCCC GGTGGCGCAC CTCAGGCAGC CGCACAGCCC
ACCGGCGAAA AGATCATCGT GACCACCGAC GAGGTGCGCG CCGAGATCGA CACCGCCGGC
GGCATCCTGT CGCGCCTGGA GCTGCTCAAC GAGCATGAGA AGGACGGCAA GCCCGTGGTG
CTGTTCGAGC GCGATACCAC GCGCACGTAC ATGGCCCGCT CCGGCCTGAT CGGCGGCGAC
CTGCCGAACC ACACCACCGT GTTCACGGCC ACCCCTGGCC CGCGCACGCT GGACGGTGCC
GACAAGCTCG AAGTCACGCT GACCGCCGAC AAGAACGGCG TGAAGTTTGT GAAGACTTAC
GTGTTCCACA AGGGCAGCTA CGTGGTCGAC GCGCGCTTTG CCGTGACCAA CGATGGCACC
GCCCCGGTCT CGCCGACGCT GTACATGGAA CTGGCGCGTG ACGGCAGCAA GGTGGAGCAG
TCGCAGTTCT ACAGCACCTT CACCGGCCCG GCCATCTACA CGGACGCGGA CAAGTACCAC
AAGATCACCT TCGACGACAT TGCCAAGGGC AAGGCCAGCA CGCCGGCCGC TACCACCAGT
GGCTGGGTCG CGATGGTGCA GCACTACTTT GCCTCGGCCT GGATTCCGCA AGCCGGCAAG
GAGCACAGCT TCTACGTCCA GCAGATCGAC CCGAACCTGT ACCGCGTGGG CATCCAGCAG
CCGCTGGGCC AGATCGCCCC GGGTGCTACG GTGACGACCG ATGCGCGCCT GTTCGCGGGC
CCGCAGGAAG AGCGCATGCT CGAGAAGATC ACCCCGGGCC TGGAGCTGGT GAAGGACTAT
GGCTGGCTGA CCATCCTAGC CAAGCCGCTG TTCTGGCTGC TCGAGAAGCT GCACGGCTTC
CTGAACAACT GGGGCTGGTC GATCATCGCG CTGACCGTGC TGATCAAGCT GGTGTTCTTC
CCGCTGTCGG CGGCGAGCTA CAAGTCCATG GGCAAGATGA AGGACCTGCA GCCGCGCATG
ACGTCGATCC GCGAACGCCA CAAGGGCGAT CCGCAGAAGA TGAACGCGGA GATGATGGCG
CTGTACAAGA CCGAGAAGGT CAACCCGCTC GGCGGCTGCC TGCCCATCGT GATCCAGATC
CCGGTGTTCA TCGCGCTGTA CTGGGTGCTG CTGTCGTCGG TGGAAATGCG CGGCGCGCCG
TGGCTGGGCT GGATCCATGA CCTGTCGGTG CCGGATCCGT TCTACATCCT GCCGATCGTG
ATGGCCGTGT CGATGTTCGT GCAGACCAGG CTGAACCCGA CCCCGCCGGA CCCCGTGCAG
GCCAAGGTCA TGATGATCAT GCCGCTGGTG TTCTCGTTCA TGTTCTTCTT CTTCCCGGCC
GGCCTGGTGC TGTACTGGGT TGTGAACAAC ATCCTGTCGA TCGCCCAGCA GTGGCAGATC
AACCGGATGC TCGGCAAGGG CAAGACCGCT GCGGTCGCCA AGAGCTGA
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| Protein sequence | MDIKRTILWV IFSMSLVLLY DNWQRANGHA SMFFPSATQQ QAASAPAASA AQGDVPKANA
TAGAAAPAAP GGAPQAAAQP TGEKIIVTTD EVRAEIDTAG GILSRLELLN EHEKDGKPVV
LFERDTTRTY MARSGLIGGD LPNHTTVFTA TPGPRTLDGA DKLEVTLTAD KNGVKFVKTY
VFHKGSYVVD ARFAVTNDGT APVSPTLYME LARDGSKVEQ SQFYSTFTGP AIYTDADKYH
KITFDDIAKG KASTPAATTS GWVAMVQHYF ASAWIPQAGK EHSFYVQQID PNLYRVGIQQ
PLGQIAPGAT VTTDARLFAG PQEERMLEKI TPGLELVKDY GWLTILAKPL FWLLEKLHGF
LNNWGWSIIA LTVLIKLVFF PLSAASYKSM GKMKDLQPRM TSIRERHKGD PQKMNAEMMA
LYKTEKVNPL GGCLPIVIQI PVFIALYWVL LSSVEMRGAP WLGWIHDLSV PDPFYILPIV
MAVSMFVQTR LNPTPPDPVQ AKVMMIMPLV FSFMFFFFPA GLVLYWVVNN ILSIAQQWQI
NRMLGKGKTA AVAKS
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