| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A3441 |
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| Symbol | |
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| ID | 3612070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | + |
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| Start bp | 3781908 |
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| End bp | 3785063 |
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| Gene Length | 3156 bp |
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| Protein Length | 1051 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637692868 |
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| Product | hydrophobe/amphiphile efflux-1 HAE1 |
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| Protein accession | YP_297643 |
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| Protein GI | 73543123 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.388058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGT TTTTCATCGA CCGGCCGGTG TTCGCGTGGG TGCTCGCGCT GATCATCGTG
CTGGGCGGGT TGCTGTCGAT CGTGCAGTTG CCGATCGCGC AGTACCCGAA CATCGCCCCG
CCGACGATCT CGGTCACCGC GACCTATCCG GGCGCCTCCG CCAGGACGCT CGAGGATTCG
GTCACCTCGG TGATCGAGCA GGAGCTCAAC GGCGCGCCCA ACCTGCTGTA CTACCAGTCG
ACCAGCGAAT CGTCGGGGCT GGCGTCGATC ACCATCGCGT TTGCGCCGGG ATCGAACGTC
GACCTGAACT CGGTCGAAGT GCAGAACCGC CTCAAGCGCG TCGAGGCGCG CCTGCCGGCG
GAAGTGCGCC AGCAGGGTGT GCGCGTCGAC AAGGCGGGCA ACAACTACAT GATGTTCCTG
ACGGTGTCGT CGAAGTCCGG CGAGGCCGAC GCCATCCAGC TGGGCAACTA CGTGTCGTCG
CAGGTGATCG ACTCGATCCG CCGCGTGCCG GGCGTGGGCC AGGCCGACCT GTTCGGCACG
GAATACGCCA TGCGTGTGTG GCTGGACCCG GCGAAGCTCA CCGGCTTCAA CCTGACGCCG
CTTGACGTCA CCGCCGCGGT GCAGGAGCAG AACATCCAGG TCGCCGTGGG CGAACTGGGC
GGCACGCCGT CGCCCAAGGG CACGGAGCTG AACGCCACCG TCACCACCGA AAGCCGCCTG
ACCACGCCGG AGCAGTTCGG CAACATCCTG CTGCGCACGA ACCCGGATGG TTCGTCGGTG
CGCATCAAGG ACGTGGGCCG CGTGGAACTC GGCGGCGCCG ATTACTCGAC GCTCGCGCGC
ACCAACGGCA AGCCGTCGGC GGCCATCGCC ATCAAGCTGG CCCCGACCGG CAACGCGCTG
GCCACGGCCA CCGCCGTGCG CGCCAAGATG GAAGAGCTGT CCAAGTACTT CCCGGCGGAC
TACCAGTACA GCGTGCCTTA CGACACGTCG GCCTTCGTCA AGATCTCGAT CGAGGAAGTG
ATCAAGACCC TGCTCGAAGC CGTGGTGCTG GTGTTCCTGG TGATGTACCT GTTCCTGCAG
AACTTCCGCG CGACGCTGAT CCCCACGCTG GTGGTGCCGA TCGCACTGCT CGGTACGTTC
GGCGCGCTGC TCGCGTTCGG TTTCTCTATC AACGTGCTGA CGATGTTCGG CATGGTGCTG
GCGATCGGTA TCCTCGTGGA TGATGCGATC GTCGTGGTGG AAAACGTCGA GCGGATCATG
AGCGAGGAAG GGCTCTCGCC ACGCCAGGCT ACGCGCAAGG CGATGGGCCA GATCACGGGC
GCCATCGTGG GCATTACGCT GGTGCTGACG GCCGTGTTCA TCCCGATGGC GTTCTTCTCG
GGCTCGGTCG GCAATATTTA CCGCCAGTTC TCGCTGTCGC TGATCGCGTC AATGGCGTTC
TCGGCACTGC TTGCGCTGAC GCTGACGCCG GCACTGTGCG CGACGCTGCT CAAGCCGGTC
GAGGCGGGTC ATCATCACGA GAAGACGGGC TTCTTCGGCT GGTTCAACCG TACGTTCGCG
CGTGCATCCA CGAGCTACCA GGGGGTGGTG GGCCGCATCC TCGCGCGCAG CGGGCGCTAC
CTGATCATCT ACGCGGTCAT CATCGTCGGC GTGGTGGTGC TGTTCAAGCG CCTGCCGTCG
TCGTTCCTGC CTGACGAAGA CCAGGGCTAC ATGATCACCG TGGTGCAGTT GCCCAACGGC
GCGACGCAGG ACCGTACCAT CGGCGTGCTC AAGCAGATCG AGGATTACTA CCTGCAGAAG
GAAAGCAAGG TGGTGGACCA GATGATCACG GTGGCGGGCT TCTCGTTCTT TGGCCGCGGC
CAGAACGGCG GTATCGCGTT CGTGCGCCTG AAGGACTGGA AGGAACGTAC CGGTGCCAAC
GAAACCGCGC AGGCGCTGGT GGGCCGTGCA TTCGGCGCGC TGTCGTTCAT CAAGGACGCC
ATCATCTTCC CGCTGAACCC GCCGGCGATT TCGGAACTCG GCAACTCGTC GGGCTTCGAC
TTCCGCCTGC AGGACCGCTC GGGCCAGGGC CACGCCAAGC TGATGGAAGC GCGCAACATG
ATGCTCGGCA TGGCGGCCAA GAACCCGGTG CTCGTGGGCG TGCGCCCTGA AGGCCAGGAA
GATGCTGCGC AGCTGCAGAT CGACATCGAC CGCGAGAAGG CCAAGGCGCT GGGCGTGACG
GTGGCAACCA TCAACTCGAC GCTGTCGATT GCGTTCGGCT CCAACTACGT CAACGACTTC
ATCTATGAAG GCCGCGTGCG CAAGGTGATC GTGCAGGCAG AAGGCGCCGA CCGCCGGCTG
CCGGACGACC TGACCAAGCT GCGCGTGCGC AACAGCAACG GCGACATGGT GGCGTTTGCC
GCGTTCGCGA CCTCGAAGTG GGTCATGGGC TCGCCGCGCC TGGAGCGCTA CAACGGCATG
CCGGCAGTGA AGATCGCGGG CCAGGCCGCA CCGGGCCACA GCACGGGTGA AGCCATGCGC
GTGATGGAAG AGAACTTCGC CAAGCTGCCG CCGGGCTTTG GGTTCGAGTG GTCGGGCCAG
TCGTACGAAG AGCGCCTGGC CGGTTCGCAA GAGCCGATGC TCTACACGCT GTCGCTGATC
ATCGTGTTCC TGTGCCTGGC CGCGTTGTAC GAAAGCTGGT CCATCCCGTT CTCGGTGCTG
CTGGTGGTGC CGCTCGGCGT GCTGGGCGCA CTGCTCGGCG TGACGCTGCG CGGCATGCCT
AACGACGTGT ACTTCAAGGT GGGCCTGATC GCGACGATCG GCTTGTCAGC GAAGAACGCC
ATCCTGATCG TGGAATTCGC CAAGGACCTG CAGGCGCAGG GCAAGGGGCT GATCGAAGCG
ACGCTCGAAG CGGTGCACCT GCGCTTCCGC CCGATCCTGA TGACGTCGAT GGCATTCATT
TTGGGCGTGC TGCCGCTGGC GATTGCCACC GGCGCGGGCT CGGGCAGCCA GCGCGCGATC
GGTACCGGCG TGATGGGCGG GATGATCACG GCCACGGCGC TGGCGATCTT CCTGGTGCCG
GTGTTCTTCG TGGTGGTGCG CAAGCGCTTC AAGGGCAGCG AGCGCCAGCA CGAATTCGAA
CGTGCGCGCC TGTCCGCAGC GCAGGAGGAC AATTGA
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| Protein sequence | MAKFFIDRPV FAWVLALIIV LGGLLSIVQL PIAQYPNIAP PTISVTATYP GASARTLEDS
VTSVIEQELN GAPNLLYYQS TSESSGLASI TIAFAPGSNV DLNSVEVQNR LKRVEARLPA
EVRQQGVRVD KAGNNYMMFL TVSSKSGEAD AIQLGNYVSS QVIDSIRRVP GVGQADLFGT
EYAMRVWLDP AKLTGFNLTP LDVTAAVQEQ NIQVAVGELG GTPSPKGTEL NATVTTESRL
TTPEQFGNIL LRTNPDGSSV RIKDVGRVEL GGADYSTLAR TNGKPSAAIA IKLAPTGNAL
ATATAVRAKM EELSKYFPAD YQYSVPYDTS AFVKISIEEV IKTLLEAVVL VFLVMYLFLQ
NFRATLIPTL VVPIALLGTF GALLAFGFSI NVLTMFGMVL AIGILVDDAI VVVENVERIM
SEEGLSPRQA TRKAMGQITG AIVGITLVLT AVFIPMAFFS GSVGNIYRQF SLSLIASMAF
SALLALTLTP ALCATLLKPV EAGHHHEKTG FFGWFNRTFA RASTSYQGVV GRILARSGRY
LIIYAVIIVG VVVLFKRLPS SFLPDEDQGY MITVVQLPNG ATQDRTIGVL KQIEDYYLQK
ESKVVDQMIT VAGFSFFGRG QNGGIAFVRL KDWKERTGAN ETAQALVGRA FGALSFIKDA
IIFPLNPPAI SELGNSSGFD FRLQDRSGQG HAKLMEARNM MLGMAAKNPV LVGVRPEGQE
DAAQLQIDID REKAKALGVT VATINSTLSI AFGSNYVNDF IYEGRVRKVI VQAEGADRRL
PDDLTKLRVR NSNGDMVAFA AFATSKWVMG SPRLERYNGM PAVKIAGQAA PGHSTGEAMR
VMEENFAKLP PGFGFEWSGQ SYEERLAGSQ EPMLYTLSLI IVFLCLAALY ESWSIPFSVL
LVVPLGVLGA LLGVTLRGMP NDVYFKVGLI ATIGLSAKNA ILIVEFAKDL QAQGKGLIEA
TLEAVHLRFR PILMTSMAFI LGVLPLAIAT GAGSGSQRAI GTGVMGGMIT ATALAIFLVP
VFFVVVRKRF KGSERQHEFE RARLSAAQED N
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