| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A3425 |
|---|
| Symbol | |
|---|
| ID | 3611055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 3759960 |
|---|
| End bp | 3763157 |
|---|
| Gene Length | 3198 bp |
|---|
| Protein Length | 1065 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637692852 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_297627 |
|---|
| Protein GI | 73543107 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.407034 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTGT CCGAGCTCTG TATCCGCCGT CCGGTGATGA CGGTGCTGCT GTGCATTGCC
GTCATCGTGA CCGGCATCGT GCTGTACCCG ACCATCCCGA TCGCGGCACT GCCCAGCTTC
AATTCGCCGG TGATCCAGGT CACCGCCACG CTGCCCGGGG CGAGCCCTGA AACCATGGCC
GCTTCGGTGG CCACGCAGCT CGAAAAGCAG TTCGCGACGA TTCCGGGCGT GACGGTGATC
AGCTCGTCGA ACACTCTCGG CAATTCGAGC ATCACCATCG AATTCAACAG CGACCGCGAC
ATCGACGCCG CGGCCGTGGA CGTGCAGGCC GCGCTGTTCC GCGCGCAGCG TTCGCTGCCG
ATCGAGATGA CGGTGCCGCC GTCGTACCGC AAGGTCAACC CGGCCGATGC GCCGGTGCTG
CTGCTGGCGA TCAACTCGCC GGCCATGAGC CTGGCCGAGC TCAATGCGTT CGGCGACAAC
CTGATCTCGC CGACGCTGGC CACGCTGCCC GGCGTGGCGC AGGTGCAGGT GTTCGGCCAG
AAGCGCTTCG CCGTGCGTGT GCGCGCCCAC CCGGATGCGC TCGCCGCGCG CGGCCTGACG
CTGGACGAGC TCGCCACGGC GCTCAACCGC GCTAACGCGA ATACGCCGGT CGGTACGCTC
GACAGCGCGC GCCAGACGCT GACCATCCAG GCCAACCGCC AGCTCGCCAA CGCCGACGCG
TTCCGCAACA TCATCGTCGC CAGCCAGGCC AACGGCGTGC TCGTGCGGCT GTCCGACGTG
GCCGAGGTCG AGGACAGCGT CGAGACCATC AAGACCGGCA GCTGGCTCAA CAACGAGCGC
TCCATCGTGC TGGCCGTGCT GCGCCAGCCT GACGCCAACA CCGTGGCTGT GGTGGACGCC
ATCAAGGGCG CCCTGCCCCG CCTGCTTGCG CAGATGCCGG GCTCGGTCAA CGTGTCGGTG
GTCAACGACC GCTCCAACTC GATCCGCGAA TCGATCCACG ACGTGCAGTT CACGCTGGCG
CTGACCGTGG CGCTGGTGGT GATGGTGATC TTCCTGTTCC TGCGCCGCGC CGCCGCCACG
TTGATCCCGA CCGTGTCGCT GCCGATCTCG TTGATCGGCA CGGTCGCGCT GATGAAGGCC
TTCGGCTACA GCCTGGACAA CGTATCGCTG CTCGCCATCA CGCTGGCCGT GGGCCTGGTG
GTGGACGACG CCATCGTGAT GCTCGAGAAC ATCGTGCGCC ATATCGAGGA AGGCGTGCCG
CCGCTTAAGG CCGCGTTGGT CGGTTCGCGC GAGATGGGCT TCACCATCCT GTCGATCTCG
ATCTCGCTGG TGGCGGTGTT CATCCCGATC TTCTTCATGC CCGGCGTGAT CGGGCTGCTG
TTCCATGAAT TCGCGGCAGT GGTGTCGCTG TCGATCCTGG TGTCGGCGCT GGTGTCGCTG
ACGCTGATCC CGATGCTGTG CGCACGCTTC CTGTCGGCCG AGAACGTGCC GGTGGATGAA
TCACAGCATG CGTACGGCGA CCATGCCGGC CACGCGCCAG CCGTGGTGCA GAAACAGACC
ATCGGCATGC GCTCGACGCA GTGGTTCGAG AACCTGTTCG AATGGACGCT GCACAAGTAT
GCCCATGGGC TGGACTGGTG CCTGGCGCAC CGGCGTGTTG TGCTGGTGGC CGCAGGTTTG
ACCTTCGTGC TGACCGCGGT ACTGTTCGTC AAGATTCCGA AGGGCTTCTT CCCCGAGGAA
GACATCGGCC AGATCCAGGT CAACGCCGAA GGCCCGCAGG ACATTTCCTT CGACGCCATG
GCCGAGCGCC TGCGCGATGC TGCCGAGCGT ATCCGCGCCA ACGCGGCGGT GAAGAGCGTC
GTGGTCTCCA TCGGCGGTGG TCCTTCGCCG GCCATCAACA CTGGCCGCAT GTTTGTCGAG
CTCAAGCCGC TCGGCGAGCG GCCGAAGATG CATCAGGTCG TCGAGTCGCT GCGCAAGGAC
GTGTCGGCGG TGCCCGGTCT GGCGGTGTAT TTCTCGCCGG TGCAGAACCT GCGCCTGGGC
GGCCGCCAGA GCAAGAGCCG CTACCAGTAC ACGCTGCAGA GCGTGAAGGC GGGCCAGCTG
CAGGAGTTCA GCGACAAGCT GATGGCGAAG ATGCGTGCCG ACACGCTGTT CCGCGACGTC
ACCAGCGACT CGCAGCAGTC AGGCCTGGAG GCTCAGCTTT CGATCGACCG CGACAAGGCC
AATGCGCTCG GCGTGCAGAT GCAAGACGTG CGCACCGCGC TGTACTCGGC GTTCGGTGAA
CGTCAGGTGT CGACCATCTA CACGCCGATC GACAACTACT ACGTGATCCT GCAGGCGGCC
GACGTCGACC GGCAGGACGA AAGCGCGTTC TCCAAGCTCT ACGTGCGCAG CAAGACCGGC
CAGATGGTGC CGATCTCCGC GTTCGCCACC ACCGAACGCC GCGTCGGGCC GATTGCCGTG
AACCACCAGG GCCAGCTCCC GTCGGTGACG GTATCGTTCA ACCTGGCGCC CGGTGCGGCG
CTGGGCGAGG CATCGGCGAA GATCGACCGC TACCGGCAGG AGATCGCCAT GCCGACCTCC
ATCTTCACGA GCTGGGGCGG TGACGCGGCG GTGTTCCAAT CGTCGCAGGC CACGCAGATC
GTGCTGCTGG TAGCGGCCAT CGCGGTCATC TACACGCTGC TGGGCGTGCT GTACGAAAGC
TACATCCACC CGCTGACGAT CCTGGCTGGC CTGCCATCGG CAGCCATCGG CGCACTGCTG
ACGCTGTTCC TGTTCGACGT CGAGCTGTCG CTGATCGCGA CCATCGGCGT GCTGATGCTG
ATCGGCATCG TGAAGAAGAA CGCCATCATG ATGATCGACT TCGCGCTGGC CGCGCAGCGC
GAACAGGGCA TGCCGCCGGC CCGCGCCATC CGCCAGGCCT GCCTGCTGCG CTTCCGGCCG
ATCATGATGA CCACCTTCGC CGCCGTCATG GGCGCGCTAC CGCTGGCGCT GGGGATTGGC
GCGGGCGCGG AACTGCGCCA GCCGCTGGGC CTGGCCGTGG TCGGTGGCCT GTTGTTCTCG
CAGGTCATCA CGCTGTTCAT CACGCCGGTG ATCTATCTGG CGCTGGATCG GTTCTCGGGC
ACGGGTCCGT TGCAGATCGA TTCGGAAGGG AATCGGTTGC CGGAAGCGGT GCAGGGTGAG
GTGGTGCACC AGCATTGA
|
|---|
| Protein sequence | MTLSELCIRR PVMTVLLCIA VIVTGIVLYP TIPIAALPSF NSPVIQVTAT LPGASPETMA
ASVATQLEKQ FATIPGVTVI SSSNTLGNSS ITIEFNSDRD IDAAAVDVQA ALFRAQRSLP
IEMTVPPSYR KVNPADAPVL LLAINSPAMS LAELNAFGDN LISPTLATLP GVAQVQVFGQ
KRFAVRVRAH PDALAARGLT LDELATALNR ANANTPVGTL DSARQTLTIQ ANRQLANADA
FRNIIVASQA NGVLVRLSDV AEVEDSVETI KTGSWLNNER SIVLAVLRQP DANTVAVVDA
IKGALPRLLA QMPGSVNVSV VNDRSNSIRE SIHDVQFTLA LTVALVVMVI FLFLRRAAAT
LIPTVSLPIS LIGTVALMKA FGYSLDNVSL LAITLAVGLV VDDAIVMLEN IVRHIEEGVP
PLKAALVGSR EMGFTILSIS ISLVAVFIPI FFMPGVIGLL FHEFAAVVSL SILVSALVSL
TLIPMLCARF LSAENVPVDE SQHAYGDHAG HAPAVVQKQT IGMRSTQWFE NLFEWTLHKY
AHGLDWCLAH RRVVLVAAGL TFVLTAVLFV KIPKGFFPEE DIGQIQVNAE GPQDISFDAM
AERLRDAAER IRANAAVKSV VVSIGGGPSP AINTGRMFVE LKPLGERPKM HQVVESLRKD
VSAVPGLAVY FSPVQNLRLG GRQSKSRYQY TLQSVKAGQL QEFSDKLMAK MRADTLFRDV
TSDSQQSGLE AQLSIDRDKA NALGVQMQDV RTALYSAFGE RQVSTIYTPI DNYYVILQAA
DVDRQDESAF SKLYVRSKTG QMVPISAFAT TERRVGPIAV NHQGQLPSVT VSFNLAPGAA
LGEASAKIDR YRQEIAMPTS IFTSWGGDAA VFQSSQATQI VLLVAAIAVI YTLLGVLYES
YIHPLTILAG LPSAAIGALL TLFLFDVELS LIATIGVLML IGIVKKNAIM MIDFALAAQR
EQGMPPARAI RQACLLRFRP IMMTTFAAVM GALPLALGIG AGAELRQPLG LAVVGGLLFS
QVITLFITPV IYLALDRFSG TGPLQIDSEG NRLPEAVQGE VVHQH
|
|---|
| |