| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A3412 |
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| Symbol | |
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| ID | 3610867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | + |
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| Start bp | 3743021 |
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| End bp | 3745711 |
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| Gene Length | 2691 bp |
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| Protein Length | 896 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637692839 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_297614 |
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| Protein GI | 73543094 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid
[TIGR01057] DNA topoisomerase I, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.210579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAAG CCCTCATCAT CGCGGAAAAG CCATCGGTCG CGGCCGATAT CGCCCGTGCC
CTCGGGGGCT TTACCAAGCA CGACGAGTAC TTTGAAAGTG ACGACTACGT GCTGTCGTCC
GCCGTGGGCC ACCTGGTGGA GATCGCCGCG CCCGACGAAT ACGAGGTCAA GCGCGGCAAA
TGGAGCTTCG CCAACCTGCC GGTGATCCCG CCGCATTTCG ACCTGCGGCC GATCGCCAAG
ACCGAGTCGC GGCTCAAGGT GCTCAACAAG CTCATCAAGC GCAAGGACGT GACCGGCCTG
ATCAACGCGT GTGACGCGGG GCGCGAAGGG GAACTGATCT TCCGCCTGAT CGCGCAGCAG
GCCAAGGCGA AGCAGCCGGT GCGCCGGCTG TGGCTGCAGT CGATGACGCC GCAGGCGATT
CGCGACGGCT TTGCGAGCCT GCGTGCCGAC GAAGACATGC TGCCGCTTGC CGATGCCGCG
CGGTGCCGCT CCGAAGCCGA CTGGCTGGTG GGTATCAACG GCACGCGCGC CATGACCGCC
TTCAACAGCA AGGGCGGTGG CTTCTTCCTG ACCACCGTGG GCCGCGTGCA GACGCCGACG
CTGTCGATCG TGGTCGAGCG CGAAGAGAAG ATCAAGCACT TCGTGCCGCG CGATTACTGG
GAGGTGCACG CCGAGTTCAT CGCCGCCGCC GGCCTGTACG AAGGCCGCTG GTTCGACCCG
AAGTTCAAGA AGAGCGAGTT CGATCCCGAG GCCCGCGAAT CGCGCCTGTG GAGCGAGGCC
GAGGCCAAGA GCATCGTGGC CGCATGCCGC GACAAGACCG GCACCGTCAC CGAGGAATCG
AAGCCGTCGA CGCAGCAGTC GCCGGCGCTG TTCGACCTGA CCACGCTGCA GCGCGAAGCC
AACTCGCGCT TCGGCTTCTC GGCCAAGAAC ACGCTCGGCC TGGCGCAGGC GCTGTATGAA
AAGCACAAGG TCCTGACCTA CCCGCGTACC GACGCGCGCG CGCTGCCCGA GGACTACATG
GAAACGGTCA AGCAGACCAT GACCATGCTG GCCGACAGCT CGCCCAATTA CCTGCCGCAC
GCGAAGAAAA TCCTGTCGCA GGGCTGGGTC AAGCCGAACA AGAAGATTTT CGACAACAGC
AAGATCAGCG ATCACTTCGC TATCATCCCG ACGCTGCAGG CGCCCAAGAA CCTGTCGGAG
CCGGAACAGA AGCTGTATGA CCTGGTTGTG CGCCGCTTCC TGGCGGTGTT TTTCCCGGCA
GCCGAATTCC AGGTCACGAC CCGCATCACG GAGGTTGCTG GCCACCACTT CAAGACCGAA
GGCAAGGTGC TGGTCAACCC GGGCTGGCTC GTGATCTACG GCCGCGAGGC GCAGGGCGAC
AAGGACGCCG CCAATCTGGT GCCGGTGGCC AAGGACGAGA AGGTCAAGAC CGACAAAGTC
GAAAGCGTGG GCCTGACGAC CAAGCCGCCC GCGCGTTACA ACGAAGCGAC GCTGCTGTCA
GCGATGGAAG GCGCGGGCAA GCTGGTGGAT GACGACGCGC TGCGCGAAGC CATGGCCGGC
AAGGGCCTTG GTACGCCGGC GACGCGCGCG GCCATCATCG AAGGCCTGCT GACGGAAAAA
TACCTCGTGC GCGAAGGCCG CGAACTGATT CCGACCGCCA AGGCGTTCCA GTTGATGACG
CTGCTGCGCG GCCTCGGCGT GCAGGAACTG ACCCAGGCCG AGCTGACCGG CGAGTGGGAG
CACAAGCTGT CGCAGATCGA ACGCGGGCGC CTGAAGCGCG ACGAGTTCAT GCTCGAAATC
GCGCAGATGA CGCAGCAGAT CGTCAAGCGC GCCAAGGAAT ACGACAGCGA TACGATCCCG
GGTGACTACG CCACGCTGGA TACGCCGTGC CCGCAGTGCG GCGGCCAGGT GAAGGAAAAC
TATCGCCGCT TTGCCTGCAT GGCATGCGAG TTCTCGATCA GCAAGATCCC TGGCGGCCGC
CAGTTCGAGA TCGAAGAGGT CGAGGAACTG CTCCTGAAGC GCGAAATCGG CCCGCTGCAG
GGCTTCCGCA GCAAGATGGG CCGGCCGTTT GCCGCCATCC TCAAGATCGC CAAGGACGAC
GAAGGCCATT TCAAGATGGA ATTCGACTTC GGCCAGAACG ATGACGAAGG CGACGGCGAG
CCGGTCGACT TCAGCGGCCA GGAGCCGGTT GGCACCTGCC CGAAATGCGG CGGCGCGGTG
TTCGAGCACG GCATGAAGTA CGTGTGCGAA AACAGTGTGG CCAGCCCGAA GAGCTGCGAC
TTCACGACCG GCAAGATCAT CCTGCAGCAG GAAATCAGCC GCGAGCAGGT CGGCAAGTTG
CTGAACGATG GCCGTACGGA TCTGCTGACT GGCTTCAAGT CGTCGCGTAC GGGCCGCAAT
TTCAAGGCTT TCCTGGTCAG ACAGGCGGAC GGCAAGATCG GCTTCGAATT CGAGGCCCGC
GAGCCGAAGG CCGGTGCCAA GGCCTCAGGC AAGACCGCAT CGCGCGCGGC TGCCGAAACC
GGGGAAGCCG AAGCGGCGGC GGCAAAGGCG CCGGCCAAGA AGGCTGCGGC AACGAAGACC
GCCACCAAGA CCACGGCGAC CAAGACCGCC GCGAAGAAGG CGCCCGCCAA GACGGTAGCG
GCCAAGAAGA CCCGCGCCGC GGGCAAGGCG ACGGTCGAAG CCGAGGAATA A
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| Protein sequence | MSKALIIAEK PSVAADIARA LGGFTKHDEY FESDDYVLSS AVGHLVEIAA PDEYEVKRGK
WSFANLPVIP PHFDLRPIAK TESRLKVLNK LIKRKDVTGL INACDAGREG ELIFRLIAQQ
AKAKQPVRRL WLQSMTPQAI RDGFASLRAD EDMLPLADAA RCRSEADWLV GINGTRAMTA
FNSKGGGFFL TTVGRVQTPT LSIVVEREEK IKHFVPRDYW EVHAEFIAAA GLYEGRWFDP
KFKKSEFDPE ARESRLWSEA EAKSIVAACR DKTGTVTEES KPSTQQSPAL FDLTTLQREA
NSRFGFSAKN TLGLAQALYE KHKVLTYPRT DARALPEDYM ETVKQTMTML ADSSPNYLPH
AKKILSQGWV KPNKKIFDNS KISDHFAIIP TLQAPKNLSE PEQKLYDLVV RRFLAVFFPA
AEFQVTTRIT EVAGHHFKTE GKVLVNPGWL VIYGREAQGD KDAANLVPVA KDEKVKTDKV
ESVGLTTKPP ARYNEATLLS AMEGAGKLVD DDALREAMAG KGLGTPATRA AIIEGLLTEK
YLVREGRELI PTAKAFQLMT LLRGLGVQEL TQAELTGEWE HKLSQIERGR LKRDEFMLEI
AQMTQQIVKR AKEYDSDTIP GDYATLDTPC PQCGGQVKEN YRRFACMACE FSISKIPGGR
QFEIEEVEEL LLKREIGPLQ GFRSKMGRPF AAILKIAKDD EGHFKMEFDF GQNDDEGDGE
PVDFSGQEPV GTCPKCGGAV FEHGMKYVCE NSVASPKSCD FTTGKIILQQ EISREQVGKL
LNDGRTDLLT GFKSSRTGRN FKAFLVRQAD GKIGFEFEAR EPKAGAKASG KTASRAAAET
GEAEAAAAKA PAKKAAATKT ATKTTATKTA AKKAPAKTVA AKKTRAAGKA TVEAEE
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