| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A3400 |
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| Symbol | |
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| ID | 3610588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | + |
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| Start bp | 3728971 |
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| End bp | 3730725 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637692826 |
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| Product | GGDEF |
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| Protein accession | YP_297602 |
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| Protein GI | 73543082 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.884579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGCGTC GTTCGCTGCC GCAGCCGCGC TGGCTGCCCC GTCTTGCGGT CATGCGGCCC
CATCGCGTGG TGGTCGGCTG TTTCGCCGTG GTGTTGCTGC TTGCGTTGGT GGTTGGATTG
CGCGACGTGT ACCTGGTGCG CGAGCGCGAC CTGCGGGCTC GCCAGCACAA TCTCGAACTG
CGCGCCCTTG GCGTCGAAGC GGTGCTGGAA GGCGAACGGC GACGGCTCGA GTACCTGAGC
ACCTACGCGG AGCGTCTGTT CGAGATCCAG GCGAGCGCGG ATGCAGTGGC GCCCGATGCG
GCGATCCGCC AGGCCTACGC GCAGCGCAAT GCCACAGTCT GGCAGATGAA GCTGCCACTG
GATGGCCCGG CCCTGATCGG CGTCGGCCCG GCGGGACTGA CAGGCCTGCG CAGCTTCGAC
CGCCGCGACC CGGATCTCAT GGCCGATCTG TACGTGGGAC GGATGATCAG CGAGCTGCTG
GGCCTCAGCA TCCGCGCGGA CCACGTTCAG GGCAACGCGA TATTCATCTC AAGCAACGGC
TTCTTCGTGG CCTACCCGGC GATCGACCCG GCCGTGGCCC CAAGCATGAT GCAACGCTTC
GACAGCATGC CGTACTACCG TGGCCAGACC CCCGAGGTGA ATCCCGGCCG CGAGCTCTAC
TGGGTACCCA TGTACGACGA TTTCCAGAGC AAGCGGCGCA TGACCACGCT CAGTGTGCCG
ATCTATGCCG GCCAGCAGTT CCGCGGCGTC GTGGCGATCG ACGTCGAGCA GAAGCGCCTT
GACGAGCTGC TGCGTGCTGC CAGCGATCCC GGCGCGGTCC AGTACATGAT GAACGCCCAT
GGCGATGTGC TGGCGATCAG CGATGACCCG GTCCGAAAGG TACAGAAATG GCCCGACGCC
GTACCCGGGA ACTGGAAGGA TTTCGCGCCA GCGGACCTGT TCGCACGCGG TAGCGGCATG
GTGAAGCACG ACGGCGACTA TCTGCTGTTC CATCGCGCGC CGCAGAGTCC CTGGCTGCTG
ATGGACCTGG TGCCGGCGCG CAAACTCTAC GCGAGCATGT TCGCGAGCAT GAGCCGGCCG
CTGCTGATGA TCTGGGTGCT GCTGCCCTTG CTGCTATGGA TCACGCTCAA GGTCGTGACG
CAGCTGTTCG ACCATTACAT CGCGCTCGGT GAAAAGCTGC AGGAGATCGC GCGGCAAGAC
CCGCTTACGG GGCTGGCCAA CCGGCGCCGC ATGCGCGAAC TGGCGCAGTC CGAATTCGAG
CGCCAGAAGC GAGACGGCCA GCCGCTGGCA CTGGTCATGA TCGATATCGA CTTCTTCAAG
AAGGTAAATG ACCACTGGGG TCATGCGAGC GGCGACAAGG TACTCGTCGA ACTCGCCCGC
ACGATGCGTG CAAACCTGCG CAACGTCGAT CAGCCGGCGC GGCTTGGCGG CGAGGAGTTC
GCCGTGCTGA TGCCAAATAC GAGCCTGGCC GAGGCCGCAC AGAGCGCGGA GCGGCTGCGA
CGTGCCATCG CGGCATGCGT GGTCGAAGCC GACCTCGAGG CCTGCGTCGA ACGGGCCGAC
CGCATCATCC GCTTCACCAT TTCCGTGGGC GTCGCCGAAG CGCGGGGCGA GGCTGCCGAC
GGTGTGCCGA TGACGCTCGA TGGCCTGGCC GCCATCGCCG ACCGGCGTCT CTACGACGCC
AAGACGCAAG GCCGCAACCG CGTGGTCAGC GACGACAACG CGCACGCTGC GGCTGTGCCG
CAGGTGCAGG CGTAA
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| Protein sequence | MWRRSLPQPR WLPRLAVMRP HRVVVGCFAV VLLLALVVGL RDVYLVRERD LRARQHNLEL
RALGVEAVLE GERRRLEYLS TYAERLFEIQ ASADAVAPDA AIRQAYAQRN ATVWQMKLPL
DGPALIGVGP AGLTGLRSFD RRDPDLMADL YVGRMISELL GLSIRADHVQ GNAIFISSNG
FFVAYPAIDP AVAPSMMQRF DSMPYYRGQT PEVNPGRELY WVPMYDDFQS KRRMTTLSVP
IYAGQQFRGV VAIDVEQKRL DELLRAASDP GAVQYMMNAH GDVLAISDDP VRKVQKWPDA
VPGNWKDFAP ADLFARGSGM VKHDGDYLLF HRAPQSPWLL MDLVPARKLY ASMFASMSRP
LLMIWVLLPL LLWITLKVVT QLFDHYIALG EKLQEIARQD PLTGLANRRR MRELAQSEFE
RQKRDGQPLA LVMIDIDFFK KVNDHWGHAS GDKVLVELAR TMRANLRNVD QPARLGGEEF
AVLMPNTSLA EAAQSAERLR RAIAACVVEA DLEACVERAD RIIRFTISVG VAEARGEAAD
GVPMTLDGLA AIADRRLYDA KTQGRNRVVS DDNAHAAAVP QVQA
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