Gene Reut_A3340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A3340 
SymbolputA 
ID3609719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp3652928 
End bp3656896 
Gene Length3969 bp 
Protein Length1322 aa 
Translation table11 
GC content67% 
IMG OID637692766 
Producttrifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 
Protein accessionYP_297542 
Protein GI73543022 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase 
TIGRFAM ID[TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0996767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACCA CCACCCTCGG CGTCAAACTC GACGACGCTT CGCGCGATCG CCTCAAGCGT 
GTCGCCCAAT CCATCGACCG GACGCCGCAC TGGCTGATCA AGCAGGCGAT CTTCACGTAT
CTCGAGCAGA TCGAGCGTGG CCACCTGCCG CATGAGGCGA TGGCAGGCGG CGCAGGGGAG
GCCGATGGCG CCGACGGTGC TGAGATGAGC CACGCCGATG GCGCACCGCA GCCGTTCCTG
GAATTCGCGC AAAGCATTCA GCCGCAATCC GTACTGCGCG CCGCAATTAC TTCGGCCTAT
CGCCGTCCTG AAACCGATTG CGTGCCGGTG CTGCTGGAGC AGGCACGCCT GCCGCAGCAA
CAGGCCGAAG CCGCCATCAA GATGGCCAAG AAGCTGGCCA CCGCGCTGCG CGAGCAGAAG
GTGGGCACCG GCCGCGAAGG CCTGGTGCAG GGCCTGATCC AGGAATTCTC CCTGTCGTCG
CAAGAAGGCG TAGCGCTGAT GTGCCTGGCC GAGGCCCTGC TGCGCATTCC CGACAAGCCC
ACGCGCGACG CGCTGATCCG CGACAAGATC AGCGGCGCCA ACTGGCAGTC GCACCTGGGC
CAGAGCCCAT CGCTGTTCGT CAACGCCGCG ACCTGGGGCC TGCTGCTGAC CGGCAAGCTG
GTCGCCACCC ATACCGAATC GGGCCTGAGC AAGGCGCTCA CGCGCATCAT CGGCAAGGGC
GGCGAACCGC TGATCCGCAA GGGCGTCGAC ATGGCCATGC GCCTGATGGG CGAGCAGTTC
GTCACGGGCG AGACCATTTC CGAAGCGCTG GCCAACGCGC GCAAGTACGA AGCGCAGGGC
TTCCGCTATT CCTACGACAT GCTTGGCGAA GCGGCGATGA CGGAAGAGGA TGCGCAGCGC
TACCTCGCGT CGTACGAGCA GGCCATCCAT GCGATTGGCC AGGCCTCGCG CGGCCGCGGC
ATCTATGAAG GCCCGGGCAT TTCGATCAAG CTGTCGGCGC TGCATCCGCG CTACAGCCGC
GCCCAGCACG AGCGGGTGAT CAACGAGCTT TATGAGCGCC TGAAGTCGCT GACGCTGCTG
GCGCGCCAGT ACGACATCGG CATCAACATC GACGCCGAAG AGGCCGACCG CCTCGAGATC
TCGCTCGACC TGCTCGAACG CCTGTGCTTC GAGCCCGAGC TGGCCGGCTG GAACGGCATC
GGCTTCGTGG TGCAGGGCTA CCAGAAGCGC TGCCCGTTCG TGATCGACTA CCTGATCGAC
CTCGCGCGCC GCAGCCGCCA CCGCCTGATG ATCCGCCTGG TTAAGGGCGC CTACTGGGAC
AGCGAAATCA AGCGCGCCCA AGTCGAAGGC CTGGAAGGCT ATCCGGTCTA CACGCGCAAG
GTCTACACCG ATGTGTCGTA CGTGGCCTGC GCGCGCAAGC TGCTGTCGGT GCCCGACGCG
ATTTATCCAC AGTTCGCCAC GCACAACGCG CACACGCTGT CGGCCATCTA CCAGATCGCC
GGCCATAGCT ACTATCCCGG CCAGTACGAA TTCCAGTGCC TGCACGGCAT GGGCGAGCCG
CTGTACGACC AGGTCGTCGG CCCGATCGCC GACGGCAAGT TCAACCGCCC GTGCCGTATC
TACGCGCCGG TTGGCACGCA TGAAACGCTG CTCGCCTACC TGGTGCGCCG CCTGCTCGAA
AACGGCGCCA ACACCTCGTT CGTCAACCGG ATTGCCGACG ACACGATTTC GCTCGATGAA
CTGGTGGCCG ACCCGGTCGC CGTGGTCGAG ACCATGCATC GCGATGAAGG CACGCTGGGC
CTGCCGCATC CGAAGATCCC GTCGCCGCGC GGCCTTTATG GCAAGTCGCG CGCGAACTCG
GCGGGTATCG ACCTTGCCAA CGAGCATCGC CTCGCTTCGC TGTCGTCCGC GCTGCTGGCC
GGTACAAGCG AACGCGTCGT GGCCGATCCG ATGCTGGGTA CCGAGGTCCC GCGCGCAGCC
GATGCCATCA CCACGCCGGT GCTGAACCCG GCCGACCATC GCGACGTCGT GGGCCAGGTC
ACTGAAGCCA GCCAGGCCGA TGTCGACGCC GCGCTGCAGG CCGCCGCCAA TGCGGCACCG
ATCTGGCAGG CCACGCCGCC CGACGTCCGT GCCTCCGCGC TTGAACGCGC CGCCGACCTG
ATGGAAGCGC AGATGCAGTC GCTGATGGGC ATCATCATGC GCGAGGCCGG CAAGACCTTC
TCGAACGCGA TCGCCGAAGT GCGCGAGGCG GTGGACTTCC TGCGCTACTA CGCGGCCGAA
GTGCGCCGCA GCTTCGACAA CGAGACGCAC CGCCCGCTGG GCCCGGTGGT CTGCATCAGC
CCGTGGAATT TCCCGCTGGC GATCTTCACC GGGCAGGTGG CCGCAGCGCT GGCCGCCGGC
AATACGGTGC TGGCCAAGCC CGCCGAGCAG ACGCCGCTGA TTGCCGCTGC CGCGGTGCGC
ATCCTGCGCG AGGCCGGCGT GCCGGCGGGT GCCGTGCAGC TGCTGCCGGG CCGTGGCGAG
ACCGTGGGCG CGGCACTGGT GGGCGACGCG CGCGTCAAGG GCGTGATGTT CACGGGCTCG
ACCGAAGTCG CGCGTATCCT CCAGCGCAAT ATCGCCGGCC GTCTCGATGC CGCCGGCCGT
CCGATTCCGC TAATCGCCGA AACCGGTGGC CAGAACGCGA TGATCGTCGA CTCGTCTGCA
CTGGCCGAAC AGGTCGTGGG CGACGTAGTC AACTCCGCGT TCGACTCGGC CGGCCAGCGC
TGCTCCGCGC TGCGCGTGCT GTGCCTGCAG GAAGACGTGG CCGACCGCGT GCTCGCCATG
CTCAAGGGCG CCATGAATGA ACTGACCATG GCCAACCCGG ACCGCCTGTC CACCGATGTG
GGCCCGGTCA TCGACGAAGA AGCGCGCGGC AATATCGTGC GCCATATCGA TGCGATGCGC
GCCAAGGGTC GCCGCGTGCA CCAGGCCGAT CCGAATGCCC CGCAGGGCGC CAGCTGCCGC
CATGGCACCT TCGTGCCGCC GACCCTGATC GAACTCGACA GCATCGACGA ACTGAAGCGC
GAGGTGTTCG GCCCCGTGCT GCACGTGGTG CGCTTCCCGC GCGCCGCGCT GGACACCATG
ATCGGCCAGA TCAACGGTAC CAACTATGGC CTGACGATGG GGATCCACAC CCGCATCGAC
GAGACCATCG CGCAGATCGT GCAGCATGCC GAGGTGGGCA ATCTGTACGT GAACCGCAAT
ATCGTCGGCG CGGTGGTGGG TGTGCAGCCG TTTGGCGGCG AGGCGCTGTC GGGCACTGGG
CCGAAGGCCG GTGGCCCGTT GTACCTGCAC CGCCTGCTGT CGGTCTGCCC GCAGGATGCG
GTGGTTCGCA GCGTGCGCCA CGCGGAAGCG TCGGGCAACC CGCCGGCTGC GCCGGAGCGC
CCAGTCGCCG CACAGGCGCT GAAGGACTGG GCGAAGACCG AGATGCCGGA AGTCGCCGCC
GCCTGCGATC GCTTTGCCGA AGCCTCGGCG GCTGGCATTT CGGTGACGCT GCGCGGGCCG
ACCGGCGAGC GCAACACCTA CTCGCTGCTG CCGCGCCACC ATGTCCTGTG CCTGGCGGCG
CAGGAACAGG ATCTGGCCAT CCAGCTCGCG GCTGTTCTGG CAGTCGGCAG CCAGGCTGTG
ATGGCGGAAA ACCCTGTTTC GCGTGGGCTG TTTGCACGGC TGCCTAAGGG CGTACAATCG
CGCGTCCGCA TTGTGTCTGA CTGGACTTCG CCGGAGCCCG CGTTCGACGC GGTGATCCAT
CATGGCGATT CCGACCAGTT GCGCACGGTG TGCGAGCAGG TCGCAGCGCG GCCGGGGCCG
ATCATCGGCG TGCAGGGCCT CGCGCAAGGT GAGCCGAATA TCGCTCTTGA ACGTTTGCTG
ATCGAGCGTT CGCTGTCGGT CAACACGGCG GCGGCCGGCG GCAACGCCAG CCTGATGACG
ATCGGCTGA
 
Protein sequence
MATTTLGVKL DDASRDRLKR VAQSIDRTPH WLIKQAIFTY LEQIERGHLP HEAMAGGAGE 
ADGADGAEMS HADGAPQPFL EFAQSIQPQS VLRAAITSAY RRPETDCVPV LLEQARLPQQ
QAEAAIKMAK KLATALREQK VGTGREGLVQ GLIQEFSLSS QEGVALMCLA EALLRIPDKP
TRDALIRDKI SGANWQSHLG QSPSLFVNAA TWGLLLTGKL VATHTESGLS KALTRIIGKG
GEPLIRKGVD MAMRLMGEQF VTGETISEAL ANARKYEAQG FRYSYDMLGE AAMTEEDAQR
YLASYEQAIH AIGQASRGRG IYEGPGISIK LSALHPRYSR AQHERVINEL YERLKSLTLL
ARQYDIGINI DAEEADRLEI SLDLLERLCF EPELAGWNGI GFVVQGYQKR CPFVIDYLID
LARRSRHRLM IRLVKGAYWD SEIKRAQVEG LEGYPVYTRK VYTDVSYVAC ARKLLSVPDA
IYPQFATHNA HTLSAIYQIA GHSYYPGQYE FQCLHGMGEP LYDQVVGPIA DGKFNRPCRI
YAPVGTHETL LAYLVRRLLE NGANTSFVNR IADDTISLDE LVADPVAVVE TMHRDEGTLG
LPHPKIPSPR GLYGKSRANS AGIDLANEHR LASLSSALLA GTSERVVADP MLGTEVPRAA
DAITTPVLNP ADHRDVVGQV TEASQADVDA ALQAAANAAP IWQATPPDVR ASALERAADL
MEAQMQSLMG IIMREAGKTF SNAIAEVREA VDFLRYYAAE VRRSFDNETH RPLGPVVCIS
PWNFPLAIFT GQVAAALAAG NTVLAKPAEQ TPLIAAAAVR ILREAGVPAG AVQLLPGRGE
TVGAALVGDA RVKGVMFTGS TEVARILQRN IAGRLDAAGR PIPLIAETGG QNAMIVDSSA
LAEQVVGDVV NSAFDSAGQR CSALRVLCLQ EDVADRVLAM LKGAMNELTM ANPDRLSTDV
GPVIDEEARG NIVRHIDAMR AKGRRVHQAD PNAPQGASCR HGTFVPPTLI ELDSIDELKR
EVFGPVLHVV RFPRAALDTM IGQINGTNYG LTMGIHTRID ETIAQIVQHA EVGNLYVNRN
IVGAVVGVQP FGGEALSGTG PKAGGPLYLH RLLSVCPQDA VVRSVRHAEA SGNPPAAPER
PVAAQALKDW AKTEMPEVAA ACDRFAEASA AGISVTLRGP TGERNTYSLL PRHHVLCLAA
QEQDLAIQLA AVLAVGSQAV MAENPVSRGL FARLPKGVQS RVRIVSDWTS PEPAFDAVIH
HGDSDQLRTV CEQVAARPGP IIGVQGLAQG EPNIALERLL IERSLSVNTA AAGGNASLMT
IG