| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A3292 |
|---|
| Symbol | |
|---|
| ID | 3609111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 3601112 |
|---|
| End bp | 3601894 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637692718 |
|---|
| Product | hydroxypyruvate isomerase |
|---|
| Protein accession | YP_297495 |
|---|
| Protein GI | 73542975 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3622] Hydroxypyruvate isomerase |
|---|
| TIGRFAM ID | [TIGR03234] hydroxypyruvate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.202186 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAC TTGCGGCAAA CCTCACCATG CTGTTCAACG AAGTGGGCTT TCTCGACCGC
TTCGAAGCCG CCGCACGCGC GGGCTTCCGC GGCGTGGAAT TCCTGTTTCC GTATGCGTTC
CACGCGGACC AGATCGCGGA CCGCCTGAAC CGCTTCCAGC TGGACCTGGT GTTGCATAAC
CTGCCGGCCG GCAAGTGGGA TGCGGGCGAG CGCGGCATTG CGTGCCACCC GGATCGCGTG
AGCGAGTTCC AGGACGGTGT GGGCGAGGCC ATCAAGTACG CCAAGGTGCT CGGCGTGCGC
CAGCTCAACT GCCTGGTCGG CATCCAGCCG CAGAACGTGA AGCGCGAGCA GGCGCAGGAA
ACGCTGGTGG AAAACCTGCG CTTCGCCGCC AATGCGCTCG CCGGCGAGCA TATCGACCTG
CTGATCGAGC CGATCAACAC GTTCGATATC CCGGGCTTCT TCCTGTCGCG CACGCAGCAG
GCGGTGGACC TGATCAACCA GGTCAACGTG CCGAATCTGT ACGTGCAGTA CGACATCTAT
CACATGCAGC GCATGGAAGG CGAGATCGCC AACACGATCA AGGCCAACCT GCCGAAGATC
AAGCATGTGC AGCTGGCCGA CAACCCGGGC CGCAACGAGC CGGGCACGGG CGAGCTGAAC
TACCAGTTCC TGTTCAAGTA CCTGGACGAA ATCGGCTACA CCGGCTGGAT CGGCTGCGAA
TACAAGCCGA AGACCACCAC TGAAGCCGGC CTGGGCTGGC GCGCCGCCCA CGGCGTGCAG
TAA
|
|---|
| Protein sequence | MTKLAANLTM LFNEVGFLDR FEAAARAGFR GVEFLFPYAF HADQIADRLN RFQLDLVLHN
LPAGKWDAGE RGIACHPDRV SEFQDGVGEA IKYAKVLGVR QLNCLVGIQP QNVKREQAQE
TLVENLRFAA NALAGEHIDL LIEPINTFDI PGFFLSRTQQ AVDLINQVNV PNLYVQYDIY
HMQRMEGEIA NTIKANLPKI KHVQLADNPG RNEPGTGELN YQFLFKYLDE IGYTGWIGCE
YKPKTTTEAG LGWRAAHGVQ
|
|---|
| |