| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A3189 |
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| Symbol | rpoB |
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| ID | 3612102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | - |
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| Start bp | 3493452 |
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| End bp | 3497558 |
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| Gene Length | 4107 bp |
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| Protein Length | 1368 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637692606 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_297393 |
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| Protein GI | 73542873 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.544144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTACA GCTTCACCGA AAAGAAGCGC ATTCGCAAAT CCTTTGCGAA GCGCGCGACG
GTTCATCAGG TTCCATTCCT GCTTGCAACC CAGATTGAAT CCTACACCCA GTTCTTGCAA
GCGGAAACGC CGGCCGCGCG TCGCAAGACC GAAGGCCTGC AGGCCGCTTT CAACGCGATT
TTCCCGATTG CCTCCCATAA CGGGCTTGCC CGTATGGAGT TTGTCTCGTA TCACCTTTCC
AACCCGCCGT TTGACGTCAA GGAATGCCAG CAGCGTGGCC TGACGTTCCA CTCGGCCCTG
CGCGCGAAGG TCCGCCTGAT CATCAACGAT CGCGAGAACC CGGGCAAGGT CAAGGAAGTG
AAGGAGCAGG AAGTGTACAT GGGCGAGATT CCGCTCATGA CCTCGACCGG CTCGTTCGTG
ATCAACGGCA CCGAGCGTGT CATCGTCTCG CAGCTGCACC GCTCGCCGGG CGTGTTCTTC
GAGCACGACA AGGGCAAGAC CCACAGCTCG GGCAAGCTGC TCTTCTCCGC ACGTATCATC
CCTTACCGTG GTTCGTGGCT GGACTTCGAA TTCGATCCGA AGGACATCCT GTACTTCCGC
GTCGACCGCC GCCGCAAGAT GCCGGTGACG ATCCTGCTGA AGTCGATCGG CCTGACGCCG
GAGCAGATCC TCGCGCACTT CTTCGTGTTC GACAACTTCA CGCTGCAGTC GGAAGGCGCG
CAGCTCGAGT TCGTGCCCGA GCGCCTGCGC GGTGAAGTCG CGCGCTTCGA CATCGCGGAC
AAGAACGGCC GCGTGGTCGT CGAGAAGGAC AAGCGGATCA ACGCCAAGCA CATCCGTGAC
CTGGACTCGG CTGGCACCAA GCTGATCAGC GTGCCGGAAG ACTATCTGCT GGGCCGCGTG
CTGGCCAAGA ACATCATCGA CCCGGACACC GGTGAGGTGA TCGCCAACGC CAACGACGAG
CTGACCGAAA CTGTTCTCGA GAACCTGCGC GAAGCCGGCG TCAAGCAGAT CCAGACCCTG
TACACCAACG ATCTGGACCA GGGCCCGTAC ATGTCGCAGA CGCTGCGCGT GGACGAGACC
GCCGACCAGA CCGCTGCGCG TATCGCGATC TACCGCATGA TGCGCCCCGG CGAGCCGCCG
ACCGAAGAAG CCGTGGAAGC GCTGTTCCAG CGCCTGTTCT ACAGCGAAGA GTCGTACGAC
CTGTCGCGCG TGGGCCGCAT GAAGGTCAAC AGCCGTCTGT CGCGCCCGAG CGGCGAGGGC
AGCATGGTGC TGCAGGACGA GGACATCCTC GAGACCATCA AGATCCTGGT CAACCTGCGT
AACGGCAAGG GCGAAGTCGA CGATATCGAC CACCTGGGCA ACCGCCGCGT GCGTTGCGTC
GGCGAACTGG CCGAGAACCA GTTCCGTGCC GGCCTGTCGC GCGTGGAGCG CGCCGTCAAG
GAACGTCTGG GCCAGGCCGA GACCGAGAAC CTGATGCCGC ACGACCTGAT CAACTCGAAG
CCGATTTCGT CGGCGATTCG CGAGTTCTTC GGTTCGTCGC AGCTGTCGCA GTTCATGGAC
CAGACCAACC CGCTGTCGGA AATCACCCAC AAGCGCCGTG TTTCGGCCCT TGGCCCGGGC
GGTCTGACGC GCGAGCGTGC CGGCTTTGAA GTCCGTGACG TGCACCCGAC CCACTATGGC
CGCGTGTGCC CGATCGAAAC GCCGGAAGGT CCGAACATTG GTCTGATCAA CTCGCTGGCA
CTGTATGCGC GCCTGAACGA GTACGGCTTC CTGGAAACGC CGTACCGCAA GGTCGAGAAC
AGCAAGCTGA CCGACCAGGT CGACTACTTG TCCGCGATCG AGGAAGGCAA GTACGTGGTG
GCGCAGGCCA ACGCGACCGT CGACGCCGAG GGCAACCTGA CCGACGAACT GGTGTCGGCA
CGTGAAGGTT CCGAGCGTGA AACCCGTATG GTCACGCCGG ACCGCGTGCA GTACATCGAC
GTGGCGCCGT CGCAGATCGT GTCGGCCGCA GCATCGCTGG TGCCGTTCCT GGAACACGAT
GACGCGAACC GTGCACTGAT GGGCGCGAAC ATGCAGCGTC AGGCCGTGCC TTGCCTGCGT
CCGGACAAGC CGCTGGTCGG TACCGGCATC GAGCGCACCG TTGCGGTCGA CTCGGGTACT
GCCGTGCAGG CGATGCGTGG CGGCGTGGTC GACTACGTCG ACGCGATGCG TATCGTGATC
CGGGTGAACG ACGACGAAGC CGTGGCCGGT GAAGTCGGCG TGGACATCTA CAACCTGATC
AAGTACACGC GTTCGAACCA GAATACGAAC ATCAACCAGC GTCCGATGGT CAAGGTCGGC
GACATCGTGG CACGCGGCGA CGTCGTGGCC GATGGCGCCT CGACCGACCT GGGCGAGCTC
GCGCTCGGCC AGAACATGCT GGTCGCGTTC ATGCCCTGGA ACGGCTACAA CTTCGAGGAT
TCGATCCTGA TCTCGGAGCG TGTGGTGGCC GAAGACCGCT ATACCTCGAT TCACATCGAG
GAACTGTCGG TCGTTGCCCG CGACACCAAG CTCGGACCTG AAGAAATTAC GCGCGATATC
TCGAACCTGG CCGAAGCCCA ATTGGCTCGC CTGGACGAGT CGGGCATCAC CTACATCGGC
GCCGAAGTCG AAGCCGGCGA CGTGCTGGTG GGCAAGGTCA CGCCGAAGGG CGAGACCCAG
CTGACCCCGG AAGAGAAGCT GCTGCGCGCA ATTTTCGGCG AGAAGGCTTC GGACGTGAAG
GACACCTCGC TGCGCGTGCC GTCGGGCATG AGCGGCATCG TGATCGACGT CCAGGTCTTC
ACCCGCGAAG GCGTGACCCG CGACAAGCGT GCCCAGTCGA TCATCGACGA CGAACTGAAG
CGCTATCGCC TGGACCTGAA CGACCAGCTG CGTATCGTGG AAGGCGACGC GTTCCAGCGT
CTGGAGCGTC TGCTGATCGA CAAGACCGTC AACGGCGGTC CGAAGAAGCT GGCAAAGGGC
GCGAAGCTGA CCAAGGAATA CCTGGCGGAA ATCGACAAGT ACCACTGGTT CGACATCCGT
CCGGCCGACG AGGAAGTGGC TGCCCAGCTG GAAGCCGTCA AGGAAGCCAT CGAGCAGAAG
CGCCACGAGT TCGACCTGGC CTTCGAAGAG AAGCGCAAGA AGCTCACGCA AGGCGACGAA
CTGCCGCCGG GCGTGATCAA GATGGTCAAG GTGTACCTGG CCGTCAAGCG CCGCCTGCAG
CCTGGCGACA AGATGGCCGG CCGTCACGGT AACAAGGGTG TGGTGTCGAA GATCGTTCCG
ATCGAAGACA TGCCGTACAT GGCGGACGGT ACCCCGGCCG ACATCGTGCT CAACCCGCTG
GGCGTGCCGT CGCGGATGAA CGTGGGCCAG ATTCTGGAAA CCCACTTGGG CTGGGCCGCG
CGCGGTCTGG GCCAGCGCAT CGGCGACATG CTCAAGGCCT CGGCCAAGGC GCAGGAACTG
CGTCCGCTGC TCGCGCAGAT CTACAACGAG AGCGGCAAGG CCGAAGACCT GGACAGCCTG
TCCGACGCCG AAGTGCTGGA ACTGGCAACG AACCTGAAGA AGGGCGTGCC GTTCGCAACG
CCGGTGTTTG ACGGTGCGCA TGAAGACGAA ATCCGCCGCA TGCTGGACCT GGCCTACCCG
GACGACATCG CCAAGGAAAA GGGTCTGACG GCTTCCAAGC AACAGGTCAC GCTGCACGAC
GGCCGCACCG GCGAGGCGTT CGAGCGTCCG GTCACGCTGG GTGTGATGCA CATGCTGAAG
CTGCACCACT TGGTCGACGA CAAGATGCAC GCGCGTTCGA CCGGTCCGTA CTCGCTGGTG
ACGCAGCAGC CGCTGGGCGG TAAGGCCCAG TTCGGTGGCC AGCGTTTCGG TGAGATGGAA
GTGTGGGCAC TGGAAGCCTA CGGCGCGTCG TACGTGCTGC AGGAAATGCT GACGGTCAAG
TCCGATGACG TGAACGGCCG TACCAAGGTG TACGAGAACA TCGTCAAGGG CGAGCACTCG
ATCGATGCCG GCATGCCGGA ATCGTTCAAC GTGCTGGTGA AGGAAATCCG CTCGCTGGGT
ATCGACATCG ACCTCGATCG CTACTGA
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| Protein sequence | MAYSFTEKKR IRKSFAKRAT VHQVPFLLAT QIESYTQFLQ AETPAARRKT EGLQAAFNAI
FPIASHNGLA RMEFVSYHLS NPPFDVKECQ QRGLTFHSAL RAKVRLIIND RENPGKVKEV
KEQEVYMGEI PLMTSTGSFV INGTERVIVS QLHRSPGVFF EHDKGKTHSS GKLLFSARII
PYRGSWLDFE FDPKDILYFR VDRRRKMPVT ILLKSIGLTP EQILAHFFVF DNFTLQSEGA
QLEFVPERLR GEVARFDIAD KNGRVVVEKD KRINAKHIRD LDSAGTKLIS VPEDYLLGRV
LAKNIIDPDT GEVIANANDE LTETVLENLR EAGVKQIQTL YTNDLDQGPY MSQTLRVDET
ADQTAARIAI YRMMRPGEPP TEEAVEALFQ RLFYSEESYD LSRVGRMKVN SRLSRPSGEG
SMVLQDEDIL ETIKILVNLR NGKGEVDDID HLGNRRVRCV GELAENQFRA GLSRVERAVK
ERLGQAETEN LMPHDLINSK PISSAIREFF GSSQLSQFMD QTNPLSEITH KRRVSALGPG
GLTRERAGFE VRDVHPTHYG RVCPIETPEG PNIGLINSLA LYARLNEYGF LETPYRKVEN
SKLTDQVDYL SAIEEGKYVV AQANATVDAE GNLTDELVSA REGSERETRM VTPDRVQYID
VAPSQIVSAA ASLVPFLEHD DANRALMGAN MQRQAVPCLR PDKPLVGTGI ERTVAVDSGT
AVQAMRGGVV DYVDAMRIVI RVNDDEAVAG EVGVDIYNLI KYTRSNQNTN INQRPMVKVG
DIVARGDVVA DGASTDLGEL ALGQNMLVAF MPWNGYNFED SILISERVVA EDRYTSIHIE
ELSVVARDTK LGPEEITRDI SNLAEAQLAR LDESGITYIG AEVEAGDVLV GKVTPKGETQ
LTPEEKLLRA IFGEKASDVK DTSLRVPSGM SGIVIDVQVF TREGVTRDKR AQSIIDDELK
RYRLDLNDQL RIVEGDAFQR LERLLIDKTV NGGPKKLAKG AKLTKEYLAE IDKYHWFDIR
PADEEVAAQL EAVKEAIEQK RHEFDLAFEE KRKKLTQGDE LPPGVIKMVK VYLAVKRRLQ
PGDKMAGRHG NKGVVSKIVP IEDMPYMADG TPADIVLNPL GVPSRMNVGQ ILETHLGWAA
RGLGQRIGDM LKASAKAQEL RPLLAQIYNE SGKAEDLDSL SDAEVLELAT NLKKGVPFAT
PVFDGAHEDE IRRMLDLAYP DDIAKEKGLT ASKQQVTLHD GRTGEAFERP VTLGVMHMLK
LHHLVDDKMH ARSTGPYSLV TQQPLGGKAQ FGGQRFGEME VWALEAYGAS YVLQEMLTVK
SDDVNGRTKV YENIVKGEHS IDAGMPESFN VLVKEIRSLG IDIDLDRY
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