Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_A3131 |
Symbol | |
ID | 3611317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007347 |
Strand | - |
Start bp | 3441034 |
End bp | 3443154 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637692548 |
Product | type II and III secretion system secretin |
Protein accession | YP_297335 |
Protein GI | 73542815 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4796] Type II secretory pathway, component HofQ |
TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCTGG GTCGCTGGTA CCGAGCGCTT GCAGGCGCAA TGACGATGAC ACTTGTGCTG GCCGCCCCGG CGGCGCTCGC ACAGGGCAAC CAGGTGAAGT CGGTCGACGC CAATGTGGTG GGCGAGCAGA CCCTGTTCAC CATCGACCTG CAGTCGCCGC CGGCGCAGAA GCCGGCGGAC TTCACAACGC AGAATCCGGC TCGCATCGCG ATCGATTTCT TCGATACCGG GTTTGCCGCC GGCCGCGCTC AGTATGACTA CGCCGGCAAG CTGCTGCGCG GGGCGAGTGT CATGCAGATC GGTGACCGCA CCCGCGTGGT GCTCGACCTG ACGCGCACGG CGACTTACCG GACCGAGGTC CGCGGCAACC AGTTCCTGGT GCTGCTCGAC AATGTCGCGC CTGCTGCCAG GGCGGCCGCG CCGACCTTTG CCGCGCCTGC CGCACCGACC GCGGTCGCCG CGGCACGTGC GTCCGTGCGC AACATCGACT TCCGGCGGGG CACGGATGGC GCGGGACGCG TGGTGGTGGA CCTGTCCTCG CGTGATTCGG GCATCAATAT CGCGCAGCAA GGCCAGAACG TGGTGGTCGA TTTCCTGGGC ACCTCGCTGC CCGAGAACCT GCGCCGTCGT TTCGACGTGA GCGACTTCGG CACGCCGGTG CAGGGCATGC GCGCCACGGA CGCCAGCGGC AATACCCGCC TGACCATCGA GCCGCGCGGC AACTGGGAGT ACAGCTCCTA CCAGACCGAC ACGCAGTTCG TGGTGGAAGT ACGGCCGATC AAGGAAGACC CGGCCAAGCT GATCAGCGGC CCGGGTTACC GTGGCGAGCG CCTGTCGCTC AACTTCCAGA ACATCGACAT CCGCTCGCTG CTGCAGGTGT TTGCCGATTT CACGAACCTG AACATCATTA CGAGCGACAC CGTACAGGGC AATATCACGC TGCGTCTCAA GGACGTGCCG TGGGACCAGG CGCTGCAGAT CGTGATGGAT GCCAAGGGGC TGGCGTCGCG ACGCAATGGC AATGTGCTGT GGGTGGCGCC CAAGGCTGAA CTGGCCACCA AGGAGAAGCT GGAGTTGGAG GCGCAGCAGC AGATCAATGA ACTCGAGCCG ATCCGCAGCC AGGTGTTCCA GCTGAACTAC CAGCGCGCCG AGGATGTGCG CAAGATGCTG CTCGGCATCA CCACGGGCGG TGCCGCAGGC GCGGCGGTCC CGGCTGTCGG CATCGGCGGC GCGGCCGGCG TGGCTTCGCG CATGCTGTCC AAGCGCGGTT CGCTGACTGC CGATGCCCGC ACCAACCAGC TGTTCGTGTC GGACATCGCC AGCAAGCTGG AAGAGGTGCA GGGGTTCCTG AACAAGATCG ACATCCCGGT GCGCCAGGTG ATCATCGAGG CGCGCATCGT CGAGGCCACC GACACGTTCA GCCGTAACCT CGGCGTAAAG CTCGGCTTTG CCGGCCAGTA CAACAACGCC CGGGTCGGCA ACACGTACAG CAACGTGCTG CCTGGCGCGA ATTCCGATAA CGGGCCGTTC CTGAGCCTGC CGGCCGGAGC GATCAACGGT ACGAACCCGG CGAACATCGC GGTCAGCATC TTCAATAGCG CCGCCACCCG GTTCCTGGCG CTCGAACTCT CGGCGCTGGA AGCGGATGGC AAGGGCAAGA TCATTTCCAG CCCGCGCGTG GTCACAGCTA ACAACATCAA GGCGCTGATC GAGCAAGGTA CGGAACTGCC TTACCAGGCA GCCACGTCCA GTGGCGCCAC CTCGGTGCAG TTCCGCAAGG CCAACCTGAA GCTGGAAGTG ACGCCCCAGA TCACGCCGGA AGGCAATGTG CTGCTCGACG TGGATGTGAA CAAGGACAGC GTGGGCATCC AGACGACCTC GGGCTTCGCC ATCGATACCA AGCACGTGCA GACCCAGGTG CTGGTAGACA ATGGCGGCAC AGTGGTCATC GGCGGTATCT ATACGCAAAC GGAAAGCACG GATGTGGACA AGGTGCCGTT CCTGGGCGAT ATCCCTGTGC TCGGCTATCT GTTCAAGAAC AACGCGAAGG TGCGCAACCG CACCGAACTG CTGGTGTTCC TGACGCCGCG TGTCCTGAAC GAGAGCGTTA CGCTGAAATG A
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Protein sequence | MTLGRWYRAL AGAMTMTLVL AAPAALAQGN QVKSVDANVV GEQTLFTIDL QSPPAQKPAD FTTQNPARIA IDFFDTGFAA GRAQYDYAGK LLRGASVMQI GDRTRVVLDL TRTATYRTEV RGNQFLVLLD NVAPAARAAA PTFAAPAAPT AVAAARASVR NIDFRRGTDG AGRVVVDLSS RDSGINIAQQ GQNVVVDFLG TSLPENLRRR FDVSDFGTPV QGMRATDASG NTRLTIEPRG NWEYSSYQTD TQFVVEVRPI KEDPAKLISG PGYRGERLSL NFQNIDIRSL LQVFADFTNL NIITSDTVQG NITLRLKDVP WDQALQIVMD AKGLASRRNG NVLWVAPKAE LATKEKLELE AQQQINELEP IRSQVFQLNY QRAEDVRKML LGITTGGAAG AAVPAVGIGG AAGVASRMLS KRGSLTADAR TNQLFVSDIA SKLEEVQGFL NKIDIPVRQV IIEARIVEAT DTFSRNLGVK LGFAGQYNNA RVGNTYSNVL PGANSDNGPF LSLPAGAING TNPANIAVSI FNSAATRFLA LELSALEADG KGKIISSPRV VTANNIKALI EQGTELPYQA ATSSGATSVQ FRKANLKLEV TPQITPEGNV LLDVDVNKDS VGIQTTSGFA IDTKHVQTQV LVDNGGTVVI GGIYTQTEST DVDKVPFLGD IPVLGYLFKN NAKVRNRTEL LVFLTPRVLN ESVTLK
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