| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A3097 |
|---|
| Symbol | |
|---|
| ID | 3609688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 3408609 |
|---|
| End bp | 3409817 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637692514 |
|---|
| Product | porin |
|---|
| Protein accession | YP_297301 |
|---|
| Protein GI | 73542781 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGCC CAAGCACTTG GGCAACCAAG ATTTCCCAAT CAGTTGACAA GGAAAGTGTC
GATATGAAGA TGAAACTGTT TGCTGCTGCC GTCGCCGCTC TGGCCGCTGG CGGCGCGTAT
GCCCAGTCGA GCGTGACCCT GTACGGTGTG GTTGACGCTG GTATCGAATA TCAGAACAAC
CAGCCGGCCA ACGTGTCGCA GGGTGTGGGC TCTGGTCACA GCGTGACCCG CATGATCTCG
GGCGGCCAGT CGGGCAGCCG TTGGGGCCTG CGTGGCGTGG AAGACCTGGG CGGTGGCCTG
AAGGGTCTGT TCGTCCTGGA AAGCGGTTTC ACCGTTGACG ATGGCAAGAT GGGCAATGAC
AGCCGTCTGT TCGGTCGCCA GGCTTACGTC GGTCTGGGCA GCCAGTACGG TCAGCTGACC
CTGGGTCGTC ACCAAACTCC GTTCTATGAC TTCGGTCTGC AGTTCGACCC GATGGCCATT
GCTTCGAACT ACTCGATCAC CGCTCAGGAC GGCGCTTTCG CGGGCCGTGC CGACAACTCG
ATCAAGTACA TCGGTACGTT CGGTGGCCTG ACCGCCAACG CTCTGTATAG CTTTGGCTCG
AACACCGGCG GCGCCACTGG CGTTTTCCAG GGCAACCAGG GTGAAGTCCC GGGCACGTGG
AAGATCGGTC GCGAATACAG CCTGGGTCTG ACCTACGCTG CTGGCCCGTT CGCAGTTGGT
GCCGTCTATG ACGAAACCAA CCTGGGCTTC ACCGCCAACC CGGACGCAAC CGTGCGCCGC
GCTTCGCTGG CTGGTACGTA CGCCTTCGGT CCGGCCAAGC TGTTCGCTGG CTACCGTTGG
GCCAAGGGTG TTGATCTGGG CACGATCCCG TTCCTGGCCA ACACGAGCCT CCAGGCAATC
AGCGGCGCGA AGGCGTCGTC GAACCTGTAC TGGCTGGGCG CTGGCTACCA AATCACGCCG
GCATTCTCGC TGACCGGCGC GGCTTACTAC CAAGACTTCC GTGGTGCCAA GGCTGATCCG
TGGCTGTTCG TTGCTACGGC TGACTACGCA CTGTCGAAGC GCACCGACGC TTACCTGAGC
CTGGCCTACG CCTACAACCG CGACAACTCG AATCTGGGTG TTAGCGGCTT CGGCAAGACC
AACGTCGACT CGACCGGCAA GGGCGACAGC CAGTTCGGCG CTACCGTTGG TATCCGCCAC
AAGTTCTAA
|
|---|
| Protein sequence | MRRPSTWATK ISQSVDKESV DMKMKLFAAA VAALAAGGAY AQSSVTLYGV VDAGIEYQNN
QPANVSQGVG SGHSVTRMIS GGQSGSRWGL RGVEDLGGGL KGLFVLESGF TVDDGKMGND
SRLFGRQAYV GLGSQYGQLT LGRHQTPFYD FGLQFDPMAI ASNYSITAQD GAFAGRADNS
IKYIGTFGGL TANALYSFGS NTGGATGVFQ GNQGEVPGTW KIGREYSLGL TYAAGPFAVG
AVYDETNLGF TANPDATVRR ASLAGTYAFG PAKLFAGYRW AKGVDLGTIP FLANTSLQAI
SGAKASSNLY WLGAGYQITP AFSLTGAAYY QDFRGAKADP WLFVATADYA LSKRTDAYLS
LAYAYNRDNS NLGVSGFGKT NVDSTGKGDS QFGATVGIRH KF
|
|---|
| |