| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A3066 |
|---|
| Symbol | |
|---|
| ID | 3609637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 3375335 |
|---|
| End bp | 3377002 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637692482 |
|---|
| Product | putative ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_297270 |
|---|
| Protein GI | 73542750 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00794174 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAGT ACGTTTTCAC CATGAACCGC GTGGGCAAGA TCGTTCCGCC CAAGCGTCAC
ATCCTGAAGG ACATCTCGCT GTCCTTTTTC CCCGGCGCCA AGATCGGCGT GCTGGGCCTG
AACGGCTCGG GCAAGTCCAC GCTGCTGAAG ATCATGGCCG GCCTCGACAA GGAGATCGAG
GGCGAAGCCA CGCCGATGCC GAACCTGAAC ATCGGCTATC TGCCGCAGGA ACCGCAGCTC
GATCCCGAGC AGACCGTGCG TGAGTCGGTC GAAGAAGCGC TGGGCGGCGT ATTCGAGGCG
CGCAAGAAGC TCGACGAGAT CTACGCGGCC TATGCCGAGC CCGATGCGGA CTTCGACGCA
CTCGCCGCCG ACCAGGCCAA GTACGAGGCC ATCCTGGCCG CGAGCGACGG CAACAACGCC
GAGCTGCAGC TGGAAATCGC CGCCGACGCA CTGCGCCTGC CGCCGTGGGA AGCGAAGATC
GGCAATCTGT CCGGTGGCGA AAAGCGCCGC GTGGCGCTGT GCCGCCTGCT GCTGTCGCGC
CCCGACATGC TGCTGCTCGA CGAACCGACC AACCACCTGG ACGCCGAGTC GGTGGACTGG
CTCGAGCAGT TCCTGACGCG CTTCCCGGGC ACCGTCGTGG CCGTGACCCA CGACCGCTAC
TTCCTCGACA ACGCCGCCGA GTGGATCCTG GAACTGGACC GCGGACAGGG CATTCCCTGG
AAGGGCAACT ACAGCTCGTG GCTCGACCAG AAGGAAGCGC GCCTCAAGCA GGAAGAGGCG
AGCGAATCGG CCCGCCAGAA GGCGCTGCAC AAGGAACTCG AATGGGTGCG CCAGAACCCG
AAGGGTCGCC AGGCCAAGTC GAAGGCGCGT CTGGCGCGCT TTGACGAGCT GAACAGCCAG
GAATACCAGA AGCGCAACGA AACCCAGGAA ATCTTCATCC CCGTGGGTGA GCGCCTGGGC
AACGAGGTCA TCGAGTTCGA TAACGTCAGC AAGGGTTTTG GCGACCGCAT GCTGATCGAG
AACCTGAGCT TCAAGGTGCC GCCGGGCGCC ATCGTCGGCA TCATCGGCCC GAACGGCGCC
GGTAAATCGA CGTTCTTCAA GATGCTCACG GGCAAGGAGC AGCCGGACAG CGGCGAGATC
AAGATCGGGC CGACCGTGAA GATGGCCTTC GTCGACCAGA GCCGCGACGC GCTCGACGGC
ACCAAGACCG TGTTCGAGGA AATCTCGGGC GGCGCCGATG TCCTGACCGT CGGCCGCTAC
GAAACGCCGT CGCGTGCCTA TATCGGCCGC TTCAACTTCA AAGGCGGCGA CCAGCAGAAG
CAGGTCGGCA CGCTGTCGGG TGGTGAACGC GGCCGCCTGC ACATGGCCAA GACGCTGATC
GCCGGCGGCA ACGTGCTGCT GCTCGATGAA CCGTCGAACG ACCTGGACGT GGAAACCCTG
CGCGCGCTGG AAGACGCGCT GCTGGAATTC GCGGGCTGCG TGATGGTGAT CTCGCACGAC
CGCTGGTTCC TGGACCGTAT CGCCACGCAC ATCCTGGCCT TTGAAGGCGA CTCGCATGTG
GAGTTCTTCC CGGGGAACTA CCAGGAGTAC GAGGCGGACA AGAAGCGTCG CCTTGGCGAG
GAAGCGGCCA AGCCTAAGCG GATCCGGTAT AAGCCGATTT CGCGCTGA
|
|---|
| Protein sequence | MAQYVFTMNR VGKIVPPKRH ILKDISLSFF PGAKIGVLGL NGSGKSTLLK IMAGLDKEIE
GEATPMPNLN IGYLPQEPQL DPEQTVRESV EEALGGVFEA RKKLDEIYAA YAEPDADFDA
LAADQAKYEA ILAASDGNNA ELQLEIAADA LRLPPWEAKI GNLSGGEKRR VALCRLLLSR
PDMLLLDEPT NHLDAESVDW LEQFLTRFPG TVVAVTHDRY FLDNAAEWIL ELDRGQGIPW
KGNYSSWLDQ KEARLKQEEA SESARQKALH KELEWVRQNP KGRQAKSKAR LARFDELNSQ
EYQKRNETQE IFIPVGERLG NEVIEFDNVS KGFGDRMLIE NLSFKVPPGA IVGIIGPNGA
GKSTFFKMLT GKEQPDSGEI KIGPTVKMAF VDQSRDALDG TKTVFEEISG GADVLTVGRY
ETPSRAYIGR FNFKGGDQQK QVGTLSGGER GRLHMAKTLI AGGNVLLLDE PSNDLDVETL
RALEDALLEF AGCVMVISHD RWFLDRIATH ILAFEGDSHV EFFPGNYQEY EADKKRRLGE
EAAKPKRIRY KPISR
|
|---|
| |