Gene Reut_A3063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A3063 
Symbol 
ID3609634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp3369918 
End bp3371156 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content68% 
IMG OID637692479 
Productsecretion protein HlyD 
Protein accessionYP_297267 
Protein GI73542747 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000572272 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAACT GGCGCAATGC AGCGGGGCTG ATTGCGGTCT TGCTGGCAGC GGGCTGCGGC 
AAGGAGAAGC CGGTAGCCGT CGCGCCCCCG CCAGCCGAGG TCGGGGTCAT GACGGTGGCG
CTGCGCGACG TGCCGCTGAT CTACGATTTC GTCGGGCAGA CGGAAAGCTC GCAGCAGGTT
GAAATCCGGG CGCGCGTCAA TGGCTTCCTG GACAAGCGGG TCTATACCGA AGGCGCGGTG
GTCAAGGCCG GCCAGACCCT GTTCCTGATG GACCGCAAGC CGTTCGAGGC CACGCTGCAG
GCGGCCGAGG CGCAGTTGGG CCAGGAGCAG GCCCGGCTGT CCACGGCGCG CGCCGACCTG
AAACGTGTAC GCCCGCTGGC TGAGCGCAAT GCCCTGAGCC AGCGCGACCT GGACGATGCC
ATTGGCAAGG AGCAAGCGGC CGCCGCAGCG GTCGAGGGGG CGCGCGCCAA TGTCATCACC
GCCAAGCTCA ATCTCGGCTA CACGACGATT ACTTCGCCGG TGGCGGGCCT GTCGAGCTTT
GCCAAGCGCC AGCCGGGCTC CTACATTGAC CCGACCAACA GCCTGCTCAC GTACGTCGCC
AAGCTGGATC CGATGTGGGT GAACTTCAGC CTGTCGGAGA ACGAGGTGTT GCGAATTCGC
ACCGAGCGCG AATCCGGCGC GATTCGTTAC CCCGAACAGG ACAAGTTCGA GGTAGCCATC
GTGCTGGCCG ACGGCACGGT ATTCCCGAAC CGCGGTCGGA TCGCTTTCGC CGATGCATCG
TTCAACGCCG AAACCGGCAC TTATCTGGTC CGTGCCGAGG TGGCCAACCC GGAAGGCGTG
CTGCGTCCCG GCCAGTTCGT GCGGGTCAAG GTGCACGGGG CCACGCGGAC GAACGCGATT
GCGGTGCCGC AGGACGCGAT CATCCAGAGC CAGCGCGGCC AGACGGTGTG GGTGATCGGC
CCGGACAACA AGGCCCAGCA GCGCGTGGTC GACGTTGGCG AGTGGACCGG CAACAACTGG
GTGGTACGTT CCGGACTGAA GCCCGGTGAG CGCGTGGCGG TGAGCGGCAC CTTGCGCCTG
GCGCCCGGTG CGCCGGTCAA GGCGGTCGAG GTCAAGCCGG GCACCGTGCC TGCGGCGGCC
AGCGGTGCCG CGGCGGAAAT GCCGGCACCT CAGGCCCCGA CGACGCCGGC ATCTGGCGCA
GCGGCGGCGG CATCGGCGCC GGCGGGAGGC AAGTCATGA
 
Protein sequence
MLNWRNAAGL IAVLLAAGCG KEKPVAVAPP PAEVGVMTVA LRDVPLIYDF VGQTESSQQV 
EIRARVNGFL DKRVYTEGAV VKAGQTLFLM DRKPFEATLQ AAEAQLGQEQ ARLSTARADL
KRVRPLAERN ALSQRDLDDA IGKEQAAAAA VEGARANVIT AKLNLGYTTI TSPVAGLSSF
AKRQPGSYID PTNSLLTYVA KLDPMWVNFS LSENEVLRIR TERESGAIRY PEQDKFEVAI
VLADGTVFPN RGRIAFADAS FNAETGTYLV RAEVANPEGV LRPGQFVRVK VHGATRTNAI
AVPQDAIIQS QRGQTVWVIG PDNKAQQRVV DVGEWTGNNW VVRSGLKPGE RVAVSGTLRL
APGAPVKAVE VKPGTVPAAA SGAAAEMPAP QAPTTPASGA AAAASAPAGG KS