Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_A3063 |
Symbol | |
ID | 3609634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007347 |
Strand | - |
Start bp | 3369918 |
End bp | 3371156 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637692479 |
Product | secretion protein HlyD |
Protein accession | YP_297267 |
Protein GI | 73542747 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000572272 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAACT GGCGCAATGC AGCGGGGCTG ATTGCGGTCT TGCTGGCAGC GGGCTGCGGC AAGGAGAAGC CGGTAGCCGT CGCGCCCCCG CCAGCCGAGG TCGGGGTCAT GACGGTGGCG CTGCGCGACG TGCCGCTGAT CTACGATTTC GTCGGGCAGA CGGAAAGCTC GCAGCAGGTT GAAATCCGGG CGCGCGTCAA TGGCTTCCTG GACAAGCGGG TCTATACCGA AGGCGCGGTG GTCAAGGCCG GCCAGACCCT GTTCCTGATG GACCGCAAGC CGTTCGAGGC CACGCTGCAG GCGGCCGAGG CGCAGTTGGG CCAGGAGCAG GCCCGGCTGT CCACGGCGCG CGCCGACCTG AAACGTGTAC GCCCGCTGGC TGAGCGCAAT GCCCTGAGCC AGCGCGACCT GGACGATGCC ATTGGCAAGG AGCAAGCGGC CGCCGCAGCG GTCGAGGGGG CGCGCGCCAA TGTCATCACC GCCAAGCTCA ATCTCGGCTA CACGACGATT ACTTCGCCGG TGGCGGGCCT GTCGAGCTTT GCCAAGCGCC AGCCGGGCTC CTACATTGAC CCGACCAACA GCCTGCTCAC GTACGTCGCC AAGCTGGATC CGATGTGGGT GAACTTCAGC CTGTCGGAGA ACGAGGTGTT GCGAATTCGC ACCGAGCGCG AATCCGGCGC GATTCGTTAC CCCGAACAGG ACAAGTTCGA GGTAGCCATC GTGCTGGCCG ACGGCACGGT ATTCCCGAAC CGCGGTCGGA TCGCTTTCGC CGATGCATCG TTCAACGCCG AAACCGGCAC TTATCTGGTC CGTGCCGAGG TGGCCAACCC GGAAGGCGTG CTGCGTCCCG GCCAGTTCGT GCGGGTCAAG GTGCACGGGG CCACGCGGAC GAACGCGATT GCGGTGCCGC AGGACGCGAT CATCCAGAGC CAGCGCGGCC AGACGGTGTG GGTGATCGGC CCGGACAACA AGGCCCAGCA GCGCGTGGTC GACGTTGGCG AGTGGACCGG CAACAACTGG GTGGTACGTT CCGGACTGAA GCCCGGTGAG CGCGTGGCGG TGAGCGGCAC CTTGCGCCTG GCGCCCGGTG CGCCGGTCAA GGCGGTCGAG GTCAAGCCGG GCACCGTGCC TGCGGCGGCC AGCGGTGCCG CGGCGGAAAT GCCGGCACCT CAGGCCCCGA CGACGCCGGC ATCTGGCGCA GCGGCGGCGG CATCGGCGCC GGCGGGAGGC AAGTCATGA
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Protein sequence | MLNWRNAAGL IAVLLAAGCG KEKPVAVAPP PAEVGVMTVA LRDVPLIYDF VGQTESSQQV EIRARVNGFL DKRVYTEGAV VKAGQTLFLM DRKPFEATLQ AAEAQLGQEQ ARLSTARADL KRVRPLAERN ALSQRDLDDA IGKEQAAAAA VEGARANVIT AKLNLGYTTI TSPVAGLSSF AKRQPGSYID PTNSLLTYVA KLDPMWVNFS LSENEVLRIR TERESGAIRY PEQDKFEVAI VLADGTVFPN RGRIAFADAS FNAETGTYLV RAEVANPEGV LRPGQFVRVK VHGATRTNAI AVPQDAIIQS QRGQTVWVIG PDNKAQQRVV DVGEWTGNNW VVRSGLKPGE RVAVSGTLRL APGAPVKAVE VKPGTVPAAA SGAAAEMPAP QAPTTPASGA AAAASAPAGG KS
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