| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A3022 |
|---|
| Symbol | |
|---|
| ID | 3611775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 3324004 |
|---|
| End bp | 3324729 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637692438 |
|---|
| Product | phosphoglycolate phosphatase |
|---|
| Protein accession | YP_297226 |
|---|
| Protein GI | 73542706 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.116956 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTGC GCCGCACCGA CTGGCGCGGC ATCGAAGGCG TGATCGTCGA TCTGGACGGC
ACCATGGTCG ACACCGCCGG GGATTTCCAC GCGTCGATCA ACGCGATGCT GCTGGCGCTC
GCGCACCTGC ACCCGAACCT GGGGCCGGTC GCGCCGATGT CCGAGCAGGA GATCGTGAGC
TTCGTCGGCA AGGGTTCGGA GAACCTGATC CGGCGCGTGC TGGACGCCCG GTTCTCGCCA
CTGCACGCCA ACGGCCTGTT CGCGCAGGCC TATGCGCTGT ACGACCGCGA GTACATCCGC
ATCAATGGCC AGTTCTCGCA GATCTACCCC GGCGTGCGCG AAGGCCTGGC GGCGCTGAAG
GCGGCCGGCC TGCGCATGGC CTGCGTGACC AACAAGCCGT ACAACTTCAC CGAGCCGCTG
CTGGCCAAGA CCGGGCTGGC GCAGTATTTC GAGCTGGTCT ACGGTGGCGA TGCGTTTCCG
CTGCGCAAGC CGGACCCGTA TCCGCTGCTC AAGGTGGCCG AGGTTTTCCA CCTCGATCCG
TCGGCCATGC TGGCCATCGG CGACTCGGAA AACGACGCGC AGGCGGCCCG CGCGGCCGGC
ATGGGTGTGC TGCTGATGCC CTACGGCTAC AACCATGGCA ACCCTGTACA AGCCGTCGAC
GCCGATGGTA TAGTCGATTC CATTGCCCGC GTGGCAGAGC TTCTTTCTGC ACACGGAACC
TGCTGA
|
|---|
| Protein sequence | MTLRRTDWRG IEGVIVDLDG TMVDTAGDFH ASINAMLLAL AHLHPNLGPV APMSEQEIVS
FVGKGSENLI RRVLDARFSP LHANGLFAQA YALYDREYIR INGQFSQIYP GVREGLAALK
AAGLRMACVT NKPYNFTEPL LAKTGLAQYF ELVYGGDAFP LRKPDPYPLL KVAEVFHLDP
SAMLAIGDSE NDAQAARAAG MGVLLMPYGY NHGNPVQAVD ADGIVDSIAR VAELLSAHGT
C
|
|---|
| |