Gene Reut_A3013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A3013 
Symbol 
ID3612024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp3316620 
End bp3317273 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content59% 
IMG OID637692429 
Productamino acid ABC transporter permease 
Protein accessionYP_297217 
Protein GI73542697 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0778792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTACG TCTTATCCCT TCTGCCGCCC CTGGCGCAGG GTGCGAAAAT CACCCTCACA 
CTATTTTTTA TCACGCTGGC CCTGTCTGTA CCGCTCGGCC TGGCGCTGGC GCTTGCCCGC
ATTTCGAAGT GGCCGCTGCT GAGCAGCCTC GTCAACGGCT ATATCTGGCT GATGCGCGGT
ACGCCGCTGA TGCTGCAGAT GCTGTTCATC TATTTCGCGC TGCCGTTCGT GCCGGTCATT
GGCGTGCGGC TGCCTGATTT TCCTGCGGCG GTGGTGGCGT TCGCGCTGAA CTACGCCGCC
TATTTCGCGG AAATCTTCCG TGCGGGCATC AAGTCGGTCG ACCGTGGACA GTACGAAGCC
AGCAAAGCGC TCGGCATGAC CTATTTCCAG ACCATGCGCC GCGTCGTGCT GCCGCAGATG
GTCAGCCGCG TATTGCCGCC GGTCAGCAAC GAGACCATCA CGCTGATCAA GGACACGTCG
CTGATCTACG TGCTGGCGCT CAACGATATT CTTCGCACCG CGCGCGGCAT CGTGCAGCGC
GATTTCACGA CCACGCCGTT CCTGGTGGCA GCGCTTTTCT ACTTGCTGAT GACGCTGATC
CTGACCTGGT TCTTCCAGAA CCTCGAGAAA CGCTATGCCA AACATGATGA CTGA
 
Protein sequence
MDYVLSLLPP LAQGAKITLT LFFITLALSV PLGLALALAR ISKWPLLSSL VNGYIWLMRG 
TPLMLQMLFI YFALPFVPVI GVRLPDFPAA VVAFALNYAA YFAEIFRAGI KSVDRGQYEA
SKALGMTYFQ TMRRVVLPQM VSRVLPPVSN ETITLIKDTS LIYVLALNDI LRTARGIVQR
DFTTTPFLVA ALFYLLMTLI LTWFFQNLEK RYAKHDD