| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A3005 |
|---|
| Symbol | |
|---|
| ID | 3612266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 3301251 |
|---|
| End bp | 3302228 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637692416 |
|---|
| Product | binding-protein dependent transport system inner membrane protein |
|---|
| Protein accession | YP_297209 |
|---|
| Protein GI | 73542689 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGTTT TCATCATCCG GCGGCTGATG CAGAGCGTGG TTGTGCTCTT CATCATGTCG
CTGCTCGTCT TTCTCGGCGT CTTCGCCATC GGCAACCCGG TCGACATCCT GATCAATCCG
CAAGCGGATC AGGAGGACAT CCGGCGCACC ATTGCCGCGC TCGGGCTCGA CAAACCGCTG
TGGGAGCAGT ATCTGGTCTT CTTGCAGAAC GCCTTGCACG GCAACCTGGG GATCTCGTTC
GCTCATGGCA CGCCCGCGCT CAAGCTGATC TTCGAGCGCA TGCCTGCGAC GCTTGAGCTG
GCCGTATGCG CGATCCTGCT GGCCATTGTT CTGGGCATTC CGCTGGGGCT TTGGGCAGGC
CTGCGCCCGA ATGGCATCGC CGGCAAGTCG ATCATGACGG TATCGATTCT CGGCTTTTCG
CTACCGACGT TCTGGGTCGG GCTGATGCTG ATCATGGTGT TCGCGGTGCA GCTCGGCTGG
CTGCCTTCGA ACGGACGCGG CGAGACCGTG CGCGTGCTTG GCGTGCCGCT GAGCTTCCTG
ACCGTCGATG GCATCCGCCA CCTGATCCTG CCGGCGGTGA CGCTGTCGCT GCTCAATATC
GCGATGGTGA TTCGCCTGAC GCGCGCGGGT ACGCAGGAGG CGATGCTGCA GGATTACGTG
AAGTTTGCCC GTGCAAAGGG ACTGTCCAAT ACGCGCATCG TCGGCGTGCA TGTGCTCAAG
AACATCATGA TCCCGATCGT GACGGTGATC GCACTGCAGT TCGGCTCTAT CATCGCGTTC
GCGATCGTGA CCGAATCGAT CTTCGCGTGG CCCGGCATGG GCAAGCTGAT CATCGATTCG
ATCCAGCTGC TCGACCGGCC CGTCATCGTT GCGTACCTGA TGGTGATCGT GACGCTGTTC
ATCCTGATCA ATCTGGCGGT GGACATCCTC TACAGCGTGC TCGATCCGCG CGTGCGCATT
GCCGACAACA AGGGCTGA
|
|---|
| Protein sequence | MLVFIIRRLM QSVVVLFIMS LLVFLGVFAI GNPVDILINP QADQEDIRRT IAALGLDKPL
WEQYLVFLQN ALHGNLGISF AHGTPALKLI FERMPATLEL AVCAILLAIV LGIPLGLWAG
LRPNGIAGKS IMTVSILGFS LPTFWVGLML IMVFAVQLGW LPSNGRGETV RVLGVPLSFL
TVDGIRHLIL PAVTLSLLNI AMVIRLTRAG TQEAMLQDYV KFARAKGLSN TRIVGVHVLK
NIMIPIVTVI ALQFGSIIAF AIVTESIFAW PGMGKLIIDS IQLLDRPVIV AYLMVIVTLF
ILINLAVDIL YSVLDPRVRI ADNKG
|
|---|
| |