| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2996 |
|---|
| Symbol | |
|---|
| ID | 3612257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 3286926 |
|---|
| End bp | 3288704 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637692407 |
|---|
| Product | acyl-CoA synthetase |
|---|
| Protein accession | YP_297200 |
|---|
| Protein GI | 73542680 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.353714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCGA CCGCAACGCC GCCCATATCC GCCGCGCTCC GCGCACCACG GAATGAAGCC
GAGTATCTCG ATGATCTGCG CCGCCGCTGG CACGCCGCCT GGCCGGCCGG TGCGCCGCGC
GAACCGCAGT ACCCGCTGGG CCGCGTGCCG CTGTCCGAGA TGCTGCGCCA TTGGGCCCGC
GAACGCCCGC AGCAGCCCGC GGTCCACTTC TATGGCCATG TCACGAGCTA TGCGGAGCTC
GATGCGCAGA GCGACCGTTG CGCCGCCTTG CTGGCCGCGC ACGGCATCGG CACCGGCGAC
CGCGTCGCGG TACTGCTGCC CAACTGCCCG CAGTTCCATG TCGTGTTCTT CGGCATCCTG
AAGTTGGGCG CGATCTACGT GCCGGTAAGC CCGCTGTCGC AGCGCGCCGA ATTGTTGCAT
GCGCTGCGCG ACAGCACGCT TTGCGCACTG ATCGCGCTGG ATCAGTTGCT GCCGCTCGTG
GCGGACACGC GCGAAGAACT TGGCGCTGAC GATCCGTTGC GCAATCTCTT TGTCGCCAGC
TACGCTGACG TCGTGCCGGC CGAGCCCACA CTGCCGTTGC CACCGATGGT GCAGGCCCCG
CGCCTGGAAC CCGAGGCCCA AGACCGCGCG ATCGACCTGC TGCGCGCGAT GTCCACCTGC
ACCGCGCCGG CGCCACAAGC AATTCCCGAT CTCGATGCCC CGGCCGCGCT CAACTACACC
GGCGGCACCA CAGGCTTGCC GAAGGGCTGC ATCCACACGC AGGGCGACAT GGTCGACATG
GCCGCCGCGT TCGGCGCCGT GGCACTGCCC ATGACCGACG ACTCCGTCAT GCTCGGCTTC
TTCCCCGAGT TCTGGATCGC GGGCGAGAAC CTGTGCCTGA TCTTCCCGGT CTTCTTTGGC
ATACCGCTGG TTTTGCTGGC GCGCTGGGAC GCCCAGACTT TCATGGCCGC CGTGCAGCAC
TACCGGGTCA CCAATGCTTC GATGCTCGTC GACAGTGCCG TCGAGGTGAT GGACCACCCG
CGCGTTGCCG ACTACGATCT GCGCTCGCTG CGCCATGTCG GCGTGTCGTC GTTCATCAAG
AAGCTGAACC TCGATTACCG CCACCGCTGG CAGGCGCTGA CCGGCGCCAC CATCGCTGAA
ACCGCGTGGG GCATGACCGA AACGCAGACC TGCAACACGT TCACCTGCGG CATGCAGGAC
AACGACATGG ACCTGCGCGC GCAGCCCGTG TTCGTCGGCC TGCCGGTGCC GGGCACCGAA
TTCAAGGTGT GCGACTTCGC CACGGGCGAA CTGCTGCCGC TCGGCACCGA GGGCGAGTTG
TGCGTGCGCA CGCCGACGCT GCTCAAGGGC TACTGGAACA AGCCCGAGGC CACACGCGAA
TCGCTGCGCG ACGGCTGGTT CCACACCGGC GACATCGGCG TGATCGACAC CGACGGCTAC
CTGCACTATC TGGGCCGGCG CAAGGAGATG CTTAAGGTCA ACGGCATGAG CGTGTTCCCG
GCCGAGATCG AAACAATGCT CGGCCAGCAC CCGGCCATCC TTGGCTCGGC CGTGGTCGGG
CGCCCCGACG AGGACCGCGG CCAGGTGCCG GTGGCCTTCG TGATGCTCAA GCCCGACGCC
GTCGGCACCG TCGACGAAGC CGCGCTGACC GCGTGGTGCC GCGGCAGCAT GGCGGTCTAC
AAGGTGCCGC AGCTTCGCAT CGTCGATGCG CTGCCGCTGA CGGCGACCGG CAAGGTGCGC
AAGCAGGACC TGGTGCCGAT GGCCGACGCA CTGCGCTGA
|
|---|
| Protein sequence | MDPTATPPIS AALRAPRNEA EYLDDLRRRW HAAWPAGAPR EPQYPLGRVP LSEMLRHWAR
ERPQQPAVHF YGHVTSYAEL DAQSDRCAAL LAAHGIGTGD RVAVLLPNCP QFHVVFFGIL
KLGAIYVPVS PLSQRAELLH ALRDSTLCAL IALDQLLPLV ADTREELGAD DPLRNLFVAS
YADVVPAEPT LPLPPMVQAP RLEPEAQDRA IDLLRAMSTC TAPAPQAIPD LDAPAALNYT
GGTTGLPKGC IHTQGDMVDM AAAFGAVALP MTDDSVMLGF FPEFWIAGEN LCLIFPVFFG
IPLVLLARWD AQTFMAAVQH YRVTNASMLV DSAVEVMDHP RVADYDLRSL RHVGVSSFIK
KLNLDYRHRW QALTGATIAE TAWGMTETQT CNTFTCGMQD NDMDLRAQPV FVGLPVPGTE
FKVCDFATGE LLPLGTEGEL CVRTPTLLKG YWNKPEATRE SLRDGWFHTG DIGVIDTDGY
LHYLGRRKEM LKVNGMSVFP AEIETMLGQH PAILGSAVVG RPDEDRGQVP VAFVMLKPDA
VGTVDEAALT AWCRGSMAVY KVPQLRIVDA LPLTATGKVR KQDLVPMADA LR
|
|---|
| |