| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2960 |
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| Symbol | |
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| ID | 3608982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007347 |
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| Strand | + |
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| Start bp | 3245367 |
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| End bp | 3247127 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637692371 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_297164 |
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| Protein GI | 73542644 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.548556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACTACC TGGTCCCTGC CATGACACTT GGTCTCGCCC TTGCACAGAG CCGTCGTATC
GCCCCCGCGC TGCTCGCCCA ACTTGAGCAG TCGGCACGCG AAAAGCAGAC GCAGCTGATC
GACGAGATCG TTGGCACCGG CACCATGACC GCGCACGACG TCGCACTGTT CGCCGCCGAC
AAGTATCAGC TTCCACTGCT CGATCTCAGC CAGTACAACA TGAACAAGGT GCCGTCCGCG
CTGGCCGGCA ACCGCGAATT CCACGCGCAC CGCCTGCTGC CGCTGGGGCG GCGCGAGAAC
CGCCTTGTCG TGGCCATGTC GGACCCGTCC AACCAGGCGG GACTCGACGC CATCAAGCAG
AAGTACAACC TGCCGCTCGA CACCGTGGTG GTGGAGCACG ACAAGCTGAT GAAGCATGTG
CGTTCCGCCG GCGAAGCGCT GGGCACGCTC AAGGACGTTG CGCCCGGCAC GCCCACTGAG
CGCAAGATGA TCGAATACGA TCCGGTCGCC GCCGCCGCGC AGCGGCCCCG CACGGGCGCC
ACCAACGACA TCGACGATGC GCCGGTCGTG CGCTTCCTGC AGAAGCTGCT GACCGAAGCC
TTCCACCGCG GCGCGTCGGA CTTGCACTTC GAGCCGTTCG AGACCTTCTA CCGCATCCGC
TTCCGCGTGG ACGGCGTGCT GCACGAGGTC GCGCGGCCGC CGCTCGATAT TCGCGACAAG
ATCGCCACGC GCATCAAGGT GCTGTCGCGC CTGGACATTT CTGAAAAGCG CGTGCCGCAG
GACGGCCGCA TGAAGCTGCT GATCGCGCTG CCCAAGGACA AGGACAAGGA CGGCAAGGAC
AAGGAAACCG TCGAGAAGGC GGTGGACTTC CGCGTGTCGA CGCTGCCCAC GCTCTTCGGC
GAGAAGATCG TGATGCGTAT CCTGGAATCA TCGTCCGACA AGCTCGATAT CGACCAGCTC
GGCTACGAGC CCGAACAGAA GGCGCTGCTG CTGGAAACCA TCAAGCGGCC CTACGGCATG
ATCCTGGTGA CCGGGCCGAC CGGCAGCGGC AAGACCGTGT CGCTCTATAC GTTCCTGAAC
CTGCTGAACC AGGGCGATAT CAATATCTCG ACCGCTGAGG ACCCGGCTGA AATCCAGCTG
CCCGGCATCA ACCAGGTCAA CGTCAACGAC AAAGCCGGCC TGACCTTTGC CGCGGCGCTG
CGTTCGTTCC TGCGGCAGGA TCCGGACATC ATCATGGTCG GCGAAATCCG CGACCTGGAA
ACCGCCGATA TCTCGATCAA GGCCGCGCAG ACAGGCCACC TGGTGCTGTC GACGCTGCAC
ACCAACGATG CGCCGACCAC GCTCACGCGC CTGATGAACA TGGGCGTGGC GCCGTTCAAC
ATCGCATCGA GCGTGCTGCT GATCACGGCG CAGCGCCTGG CGCGGCGGCT GTGCACCTGC
AAGAAGCCCG GCACGATCCC GCGCGAAGCG CTGCTCGACG CCGGGTTCAA GGAACCGCAG
CTCGACGGTA GCTGGCAGCC GTACCATCCG GTCGGCTGCG AGCGCTGCAA TGGCAGCGGC
TACAAGGGAC GCTGCGGCAT CTACCAGGTT ATGCCGATCA CCGAGGCGAT GCAGCAGATC
ATCCTGTCGC ACGGTACGGC GCTGCAGATT GCCGAGCAGG CGCGGCGCGA CGGCGTGCTA
TCGTTGCGGG AAGCTGGCCT GCTCAAGGTC AAGCAAGGGG TCACGTCACT CGAAGAAGTG
CTGGCCACCA CCAATTCATA A
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| Protein sequence | MHYLVPAMTL GLALAQSRRI APALLAQLEQ SAREKQTQLI DEIVGTGTMT AHDVALFAAD
KYQLPLLDLS QYNMNKVPSA LAGNREFHAH RLLPLGRREN RLVVAMSDPS NQAGLDAIKQ
KYNLPLDTVV VEHDKLMKHV RSAGEALGTL KDVAPGTPTE RKMIEYDPVA AAAQRPRTGA
TNDIDDAPVV RFLQKLLTEA FHRGASDLHF EPFETFYRIR FRVDGVLHEV ARPPLDIRDK
IATRIKVLSR LDISEKRVPQ DGRMKLLIAL PKDKDKDGKD KETVEKAVDF RVSTLPTLFG
EKIVMRILES SSDKLDIDQL GYEPEQKALL LETIKRPYGM ILVTGPTGSG KTVSLYTFLN
LLNQGDINIS TAEDPAEIQL PGINQVNVND KAGLTFAAAL RSFLRQDPDI IMVGEIRDLE
TADISIKAAQ TGHLVLSTLH TNDAPTTLTR LMNMGVAPFN IASSVLLITA QRLARRLCTC
KKPGTIPREA LLDAGFKEPQ LDGSWQPYHP VGCERCNGSG YKGRCGIYQV MPITEAMQQI
ILSHGTALQI AEQARRDGVL SLREAGLLKV KQGVTSLEEV LATTNS
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