| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2855 |
|---|
| Symbol | aroE |
|---|
| ID | 3611866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 3128339 |
|---|
| End bp | 3129223 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637692266 |
|---|
| Product | shikimate 5-dehydrogenase |
|---|
| Protein accession | YP_297060 |
|---|
| Protein GI | 73542540 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0169] Shikimate 5-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.39713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATCCA CCGAATCCTC CCAGCCGGCT GACCGCTACG TCGTGGTCGG CAACCCCGTC
GCGCACAGCC GTTCGCCGTT CATCCACGCC GCGTTTGCCA GGCAGACCGG CGAAGCCGTC
GAATACGGTC GCCTGGAAGC GCCGCTCGAC GCGTTCGCAG ACACCATGCG CGCGTTCCTT
GCTGAAGGCG GCTATGGCTT CAACGTGACC GTGCCGTTCA AGCTGCAGGC CTATGATCTG
GCCGACCGCC TGACGCCGCG CGCGGAAGCC GCCGGCGCGG TCAACACGAT GTGGATCGAG
GATGGCCTGA TCCACGGCGA CAATACCGAC GGCATCGGCC TCGTGCGCGA TATCCAGGAC
AATCTCGACA CCCTGCTCGA AGACAAGCGT GTGCTGCTGC TCGGCGCGGG CGGCGCGGCC
ATGGGCGCGA TGCTGCCGCT GATTGAATGC CGGCCCTCGC GCATTGTGGT GGCCAACCGC
ACGGCCTCGC GCGCGAGCGA CATGCTCGAA GAGTTCGTGG AAGCGGCCGA TTCGTTCGGC
GTGGAGTTGT GGGGCGGTGG CCTCGATGCG CTTGAGCAGC TGTCCGAAGA CGATGTCTGC
GACGTCGTCA TCAACGCATC GTCGAGCAGC CTGCATGGCG AAGTGCCGCC GGTGCCGGCG
TTCCTGCTCG GCGACGGCGT GCTCGCCTAC GACATGATGT ACGGCGCCGA GCCGACCGTA
TTCCTGCAGC ACGCTGCGCA ATGCGGCGCG CGCACGGCCG ACGGTCTCGG CATGCTGGTC
GAACAGGCGG CTGAAGCGTT CTACATCTGG CGCGGCGTGC GTCCGCGCAC CGCGCCCGTG
CTGGCCGACC TGCGCGCCGC GCTGCAGGCC GAGCGCAAGG GCTGA
|
|---|
| Protein sequence | MTSTESSQPA DRYVVVGNPV AHSRSPFIHA AFARQTGEAV EYGRLEAPLD AFADTMRAFL
AEGGYGFNVT VPFKLQAYDL ADRLTPRAEA AGAVNTMWIE DGLIHGDNTD GIGLVRDIQD
NLDTLLEDKR VLLLGAGGAA MGAMLPLIEC RPSRIVVANR TASRASDMLE EFVEAADSFG
VELWGGGLDA LEQLSEDDVC DVVINASSSS LHGEVPPVPA FLLGDGVLAY DMMYGAEPTV
FLQHAAQCGA RTADGLGMLV EQAAEAFYIW RGVRPRTAPV LADLRAALQA ERKG
|
|---|
| |