Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_A2810 |
Symbol | secD |
ID | 3612245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007347 |
Strand | + |
Start bp | 3080117 |
End bp | 3081982 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637692221 |
Product | preprotein translocase subunit SecD |
Protein accession | YP_297015 |
Protein GI | 73542495 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0342] Preprotein translocase subunit SecD |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGTT ATCCGCTTTG GAAATATGTC GTGATCCTGG TGGCCCTGGC CATCGGCATC ATCTATACCC TGCCGAACTT CTTCGGCGAG GCGCCTGCCG TGCAGGTCTC CTCGGGAAAG GCCACGGTCA AGGTGGACCT CTCCATGCAA AAGCATGTGG AGGAAATCCT GGCCCAGAAC CAGCTCCAGC CTGACGGCGT GTTCTTCGAT GTATCGGGCC AGTCCGGCTC GGTCAAGGCG CGCTTCCGTA CCACCGACGA CCAGCTCAAG GCCAAGGACG TCTTGTCGCG CGCGCTCAAT CCGGACGCTA CCGATCCGAC TTACGTGGTC GCGCTGAACC TGCTCTCCGG CTCGCCGCGC TGGCTGACCG CGATGCATGC GCTGCCAATG TACCTGGGCC TGGACCTGCG CGGCGGCGTG CACTTCCTGC TGCAGGTCGA CATGAAGGGT GCCGTCGACA AGAAGCTCGA CAGCCTGGCG GGCGATGCCC GCACCCTGCT GCGCGACAAG AACGTGCGCC ACGGCGGCAT CGACCGCGAC GGCGACAAGC TGACCGTGCG CTTCAACAAT GCCGACGACG CCAACCGCGC GCGCGGTATC CTGGCCGACA ACCTGCGCGA ACTCGCCTTC GCGATGGACG GCAACAACGT GGTCGGCACC TTCACCGAAG CCGCCCGCAA GGCCGTGCAG GACGCCGCCG TCAAGCAGAA CATCACCACG CTGCACAACC GCGTGAACGA ACTCGGCGTG GCCGAGCCGG TGATCCAGCA GCAAGGCGCC GACCGCATCG TGGTCCAGCT GCCTGGCGTG CAGGACACCG CCAAGGCCAA GGACATCATC GGCCGCACCG CCACGCTGGA AGCCCGCCTG GCCGATCCGG ACGCACCGCG CAACCCGCGC GCAGGCGACC CGGTTCCGTT CGGCAGCGAG CTGTTCACGC AAGGCAACGG CGCCCCAGTC GTGCTGAAGA AGCAAGTCAT CTTCACCGGC GACCGCATCG AAAGCGCATC GGCCGGCTTC GACCAGAACC AGCGCCCGTC GGTCAACATC AAGCTCGACG CCCAGGGCGG CCGCGTGCTG CGCGACGTCT CGCGCGAGAA CATCGGCAAG CCGATGGGCA TCGTGCTGTT CGAAAAGGGC AAGGGCGAGG TGCTGACGGT CGCGACGATC CAGTCCGAAC TCGGCTCGAG CTTCCAGATC ACCGGCTCCT ACTCGACCGA AGCGGCCAAC GACCTCGCGC TGCTGCTGCG CGCCGGCTCG CTGGCCGCGC CGATGGAGAT CATCGAGGAA CGCACGATCG GCCCGTCGTT GGGCGCGGAC AACATCCAGA AGGGCTTTGA CTCGGTGGCT TACGGCTTCG GTGCCATCAC CGTGTTCATG GTGCTGTACT ACATGCTGTT CGGCGTGTTC TCGGTCGCGG CGCTAGGCAT CAACCTGCTG CTGCTGATCG CTGTGCTGTC GATGCTGCAG GCCACGCTCA CGCTGCCAGG TATTGCCGCT ATCGCGCTGG TGCTGGGTAT GGCCATCGAC GCGAACGTGC TGATCAACGA ACGTATCCGC GAGGAACTAC GCGCGGGTGC TTCGCCGCAG ATGGCCATCG CCGTCGGCTT CGAACGCGCC TGGGCCACCA TCCTGGACTC CAACGTCACC ACGCTGATCG CGGGCCTGGC GCTGCTGGCG TTCGGCTCCG GCCCGGTGCG CGGCTTTGCC GTGGTGCACT GCCTGGGCAT CCTGACCTCG ATGTTCTCGG CGGTGTTCTT CAACCGCGGC CTGGTCAACC TCTGGTACGG CCGCAAGAAG AAGCTGCAGA GCGTGGCCAT CGGCCAGATC TGGAAACCGG GTGCGGACTC CCCGGTCGCC AAGTAA
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Protein sequence | MNRYPLWKYV VILVALAIGI IYTLPNFFGE APAVQVSSGK ATVKVDLSMQ KHVEEILAQN QLQPDGVFFD VSGQSGSVKA RFRTTDDQLK AKDVLSRALN PDATDPTYVV ALNLLSGSPR WLTAMHALPM YLGLDLRGGV HFLLQVDMKG AVDKKLDSLA GDARTLLRDK NVRHGGIDRD GDKLTVRFNN ADDANRARGI LADNLRELAF AMDGNNVVGT FTEAARKAVQ DAAVKQNITT LHNRVNELGV AEPVIQQQGA DRIVVQLPGV QDTAKAKDII GRTATLEARL ADPDAPRNPR AGDPVPFGSE LFTQGNGAPV VLKKQVIFTG DRIESASAGF DQNQRPSVNI KLDAQGGRVL RDVSRENIGK PMGIVLFEKG KGEVLTVATI QSELGSSFQI TGSYSTEAAN DLALLLRAGS LAAPMEIIEE RTIGPSLGAD NIQKGFDSVA YGFGAITVFM VLYYMLFGVF SVAALGINLL LLIAVLSMLQ ATLTLPGIAA IALVLGMAID ANVLINERIR EELRAGASPQ MAIAVGFERA WATILDSNVT TLIAGLALLA FGSGPVRGFA VVHCLGILTS MFSAVFFNRG LVNLWYGRKK KLQSVAIGQI WKPGADSPVA K
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