| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2790 |
|---|
| Symbol | |
|---|
| ID | 3612321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 3060255 |
|---|
| End bp | 3061775 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637692201 |
|---|
| Product | D-lactate dehydrogenase (cytochrome) |
|---|
| Protein accession | YP_296995 |
|---|
| Protein GI | 73542475 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCCC CGCACGAAGC CCCACTGACC ACCGGCGCCA CACCCGCCGG TAACGGCGCC
GCCGATGGCC GCCGCAGCGC GCTGCTGGCG GGCCTTGCGC AGATCCTGCC GGACGCCGCA
TTGCTGTGGA AGCCGGAAGA CACCGTCCCC TACGAGTGCG ACGGCCTGGC CGCCTACCGC
CAGGTGCCGA TGGCCGTGGC CCTGCCCGAT ACCGAGGAAC AGGTCTGCGC GATCCTGCGC
CTGTGCCACA GGCTCAGCGT GCCCGTGGTG CCGCGCGGCG CGGGGACGAG CCTGTCCGGC
GGCGCCATGC CGATCGCCGA AGGGCTGGTG CTGTCGCTGG CCAAGTTCAA GCGCATCCTG
AAAGTTGACC CGCACTCACG CACCGCGGTG GTCCAGCCGG GCGTGCGCAA CCTGGCCATC
TCCGACGCCG CCGCTCCCTT CAACCTGTAT TACGCGCCCG ATCCGTCGTC GCAGATCGCC
TGCACCATCG GCGGCAACGT CAGCGAAAAT TCGGGCGGCG TGCACTGCCT GAAATACGGC
CTGACCGTGC ATAACGTGCT GCGCGTGCGC GCGGTGACGA TGGAAGGCGA GGTCGTCGTG
TTCGGCTCCG AAGCCCCGGA TTCGCCGGGC CTGGATCTGC TCGCCGCAAT GATCGGCTCC
GAAGGCATGC TGGCCGTGGT AACCGAAGTC ACCGTGCGCC TGATCCCGAA GCCCCAGCTT
GCGCAGGTGA TCATGGCCTG CTTCGACGAC GTGGAAAAAG GCGGCAACGC GGTGGCCGCG
ATCATCGCGG CCGGCATCAT CCCGGCAGGC CTGGAGATGA TGGACAAACC CGCCACGGCC
GCCGTGGAAG AGTTCGTGCA CGCTGGCTAC GACCTCGACG CCGCGGCCAT CCTGCTATGC
GAATCCGATG GCACGCCCGA GGAGGTCGCA GAGGAAATCG AGCGCATGAG CGCGGTGCTG
ACGGCTTCGG GGTGCACGCG CATCGTCGTC TCGCAGAACG AAGCCGAGCG CCTGCGTTTC
TGGAGCGGCC GCAAGAACGC GTTCCCGGCG GCGGGCCGCA TCTCGCCTGA CTATTACTGC
ATGGACGGCA CTATCCCGCG CAAGCATATC GGCACACTGC TGCGCCGCAT CGAAGAGATG
GAGCGCAAGT ACGCGCTGCG CTGCATCAAC GTGTTCCATG CCGGCGACGG CAATATGCAT
CCGCTGATCC TGTTCGATGG TGCGGACGAG GACCAGTGGC ACCGTGCCGA GCTGTTTGGC
TCGGACATCC TGGAAGCTTG CGTGGAACTG GGCGGCACCG TCACCGGCGA ACACGGCGTG
GGCGTGGAGA AGCTCAACTC GATGTGCGTG CAGTTCTCGC CGTCCGAGCG CGATGCCTTC
TTTGGCGTCA AGGCTGCCTT CGACCCGGCG CGACTGCTGA ACCCGGACAA GGCCATCCCG
ACGCTCGCGC GCTGCGCCGA ATACGGCAAG ATGCACGTCA AGAAGGGGCT GCTGCCCCAC
CCCGACCTGC CGCGCTTCTG A
|
|---|
| Protein sequence | MNAPHEAPLT TGATPAGNGA ADGRRSALLA GLAQILPDAA LLWKPEDTVP YECDGLAAYR
QVPMAVALPD TEEQVCAILR LCHRLSVPVV PRGAGTSLSG GAMPIAEGLV LSLAKFKRIL
KVDPHSRTAV VQPGVRNLAI SDAAAPFNLY YAPDPSSQIA CTIGGNVSEN SGGVHCLKYG
LTVHNVLRVR AVTMEGEVVV FGSEAPDSPG LDLLAAMIGS EGMLAVVTEV TVRLIPKPQL
AQVIMACFDD VEKGGNAVAA IIAAGIIPAG LEMMDKPATA AVEEFVHAGY DLDAAAILLC
ESDGTPEEVA EEIERMSAVL TASGCTRIVV SQNEAERLRF WSGRKNAFPA AGRISPDYYC
MDGTIPRKHI GTLLRRIEEM ERKYALRCIN VFHAGDGNMH PLILFDGADE DQWHRAELFG
SDILEACVEL GGTVTGEHGV GVEKLNSMCV QFSPSERDAF FGVKAAFDPA RLLNPDKAIP
TLARCAEYGK MHVKKGLLPH PDLPRF
|
|---|
| |