| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2656 |
|---|
| Symbol | groEL |
|---|
| ID | 3611295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 2914154 |
|---|
| End bp | 2915797 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637692066 |
|---|
| Product | chaperonin GroEL |
|---|
| Protein accession | YP_296861 |
|---|
| Protein GI | 73542341 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
|---|
| TIGRFAM ID | [TIGR02348] chaperonin GroL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCAA AAGACGTAGT ATTTGGCGAC GCCGCCCGTG CCAAGATGGT CGAAGGCGTG
AACATTCTCG CCAACGCAGT GAAGGTTACC CTGGGTCCGA AGGGCCGCAA CGTGGTGCTG
GAGCGCAGCT TCGGCGGCCC GACCGTGACC AAGGACGGCG TGTCCGTGGC CAAGGAAATC
GAGCTGAAGG ACAAGCTGCA GAACATGGGC GCCCAGATGG TCAAGGAAGT GGCTTCCAAG
ACCAGCGACA ACGCCGGTGA CGGTACCACC ACCGCTACCG TTCTGGCCCA GTCGATCGTG
CGCGAAGGCA TGAAGTTCGT CGCCGCCGGC ATGAACCCGA TGGACCTGAA GCGCGGTATC
GACAAGGCTG TCGCCGCCGC CGTGGAAGAG CTGAAGAAGG TCAGCAAGCC GACCACCACC
AGCAAGGAAA TCGCCCAGGT TGGCGCGATC TCGGCCAACA GCGACACCTC GATCGGTGAG
CGCATTGCCG AAGCCATGGA CAAGGTCGGC AAGGAAGGCG TGATCACCGT CGAAGACGGC
AAGTCGCTGG CCGACGAGCT GGAAGTCGTG GAAGGCATGC AGTTCGACCG CGGCTACCTG
TCGCCGTACT TCATCAACAA CCCCGAAAAG CAAGTTGTCC AGCTGGACAG CCCGTTCGTG
CTGCTGTTCG ACAAGAAGGT TTCGAACATC CGCGACCTGC TGCCGGTGCT GGAGCAAGTG
GCCAAGGCTG GCCGCCCGCT GCTGATCATT GCTGAAGACG TCGAGGGCGA AGCCCTGGCG
ACCCTGGTGG TCAACAACAT CCGTGGCATC CTGAAGACCG CCGCCGTCAA GGCTCCGGGC
TTCGGCGACC GCCGCAAGGC CATGCTGGAA GACATCGCCA TCCTGACCGG CGGCACCGTC
ATCGCTGAAG AAATCGGCCT GACGCTGGAA AAGGCGACCC TGAACGACCT GGGCCAAGCC
AAGCGCATCG AAATCGGCAA GGAAAACACC ATCATCATCG ACGGCGCCGG CGACGCAGCT
GCGATCGAAG GCCGCGTGAA GCAGATCCGT GCCCAGATCG AAGAAGCGAC CTCGGACTAC
GACCGTGAAA AGCTGCAAGA GCGCGTGGCC AAGCTGGCCG GCGGTGTTGC CGTGATCAAG
GTTGGCGCTG CCACCGAAGT CGAAATGAAG GAAAAGAAGG CCCGCGTGGA AGACGCCCTG
CACGCCACCC GCGCTGCGGT GGAAGAAGGC ATCGTCCCCG GCGGCGGTGT GGCCCTGCTG
CGTGCCCGCG CTGCGATCTC GGCACTGACC GGTGAAAACC CGGACCAGAA CGCCGGTATC
AAGATCGTGC TGCGCGCCAT GGAAGAGCCG CTGCGCCAGA TCGTGCTGAA CGCTGGTGAA
GAAGCTTCGG TCGTCGTTGC CAAGGTCATC GAAGGCAAGG GCAACTACGG CTACAACGCG
GCTTCGGGCG AGTACGGCGA CCTGGTGGAA ATGGGCGTGC TGGATCCGAC CAAGGTTACC
CGCACCGCAC TGCAGAACGC CGCTTCGGTG GCATCGCTGA TGCTGACCAC GGACTGCGCA
GTTGCCGAAA CGCCGAAGGA AGAGTCGGCT CCGGCAATGC CGGGCGGCAT GGGCGGCATG
GGCGGCATGG AAGGCATGAT GTAA
|
|---|
| Protein sequence | MAAKDVVFGD AARAKMVEGV NILANAVKVT LGPKGRNVVL ERSFGGPTVT KDGVSVAKEI
ELKDKLQNMG AQMVKEVASK TSDNAGDGTT TATVLAQSIV REGMKFVAAG MNPMDLKRGI
DKAVAAAVEE LKKVSKPTTT SKEIAQVGAI SANSDTSIGE RIAEAMDKVG KEGVITVEDG
KSLADELEVV EGMQFDRGYL SPYFINNPEK QVVQLDSPFV LLFDKKVSNI RDLLPVLEQV
AKAGRPLLII AEDVEGEALA TLVVNNIRGI LKTAAVKAPG FGDRRKAMLE DIAILTGGTV
IAEEIGLTLE KATLNDLGQA KRIEIGKENT IIIDGAGDAA AIEGRVKQIR AQIEEATSDY
DREKLQERVA KLAGGVAVIK VGAATEVEMK EKKARVEDAL HATRAAVEEG IVPGGGVALL
RARAAISALT GENPDQNAGI KIVLRAMEEP LRQIVLNAGE EASVVVAKVI EGKGNYGYNA
ASGEYGDLVE MGVLDPTKVT RTALQNAASV ASLMLTTDCA VAETPKEESA PAMPGGMGGM
GGMEGMM
|
|---|
| |