| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2489 |
|---|
| Symbol | |
|---|
| ID | 3609339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 2728331 |
|---|
| End bp | 2730127 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637691898 |
|---|
| Product | twin-arginine translocation pathway signal:copper-resistance protein CopA |
|---|
| Protein accession | YP_296694 |
|---|
| Protein GI | 73542174 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2132] Putative multicopper oxidases |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01480] copper-resistance protein, CopA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.211197 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGCG ATCCCACGAC CGGCTTGCTG CTGCCCAACC TGTCCCGGCG CCGCTTCGTG
CAAGGGCTGG CGGCCGGTGG CGTGCTGGCC GGTTTGCCGG TGTGGCAGGG GAGCGCACAC
GCGCAGCCGG CGGCGACGGC ATTCGGCACG GCGCCCGTGC TGCGTGGCAC CGAATTCGAC
CTTGTGGTCG CCGAATCGAT GGTCAACTTC ACGGGCAAGC CTGCCCTGGC CACGACCATC
AACGGCATGT TGCCGGGACC GACACTGCGC TGGCGCGAGG GCGATACGGT CACCATCCGC
GTGACCAACC GCCTGCGCGA ACACACGTCG ATCCACTGGC ACGGCATCAT CCTGCCGTAC
CAGATGGACG GCGTGCCCGG CATCAGCTTT GGCGGCATCG CGCCCGGCGA GACCTTCACC
TACCGCTTCA AGGTCGCGCA AAGCGGCAGC TACTGGTACC ACTCGCATTC CGGCTTCCAG
GAGATGATCG GGCTGTACGG CGGCATCATC GTCGACCCCG CCGGGGAAGA TCCTGTGCGC
GCCGACCGCG ACTACACCGT GTTGTTGTCC GACTGGACCG ACGAAGACCC GATGCGCGTG
CTGTCGAAGC TGAAGGTCCA GAGCGATTAC TACAACTACA ACCAGCCCAC CGCTGTCGAT
TTCTTCCGCG ACGTGTCGAA CGACGGCCTG AAGGCCGCGC TCGACAAGCG CCGCATGTGG
AACCAGATGC GCATGAACCC GACCGATCTC GCGGACATGT CGGGTGCAAC GCTCACGTAC
CTGACCAATG GCCTCACACC GGCGGGCAAC TGGACGGGGC TGTTCCGGCC CGGCGAGCGC
GTGCGGCTGC GCTTCATCAA CGGCGCCGGC AATACCTTCT TCGACGTGCG CATTCCGGGC
CTGAAGCTTC GGGTGGTGCA GGTCGATGGC GTCAACATCG AGCCGGTCAC GGTCGATGAA
TTCCGCTTCG GACCCGGCGA AACTTGCGAC GTCGTGGTCG AACCGCGCGA CGACGCCTAC
ACGATCTTCT CGCAGTCGAT GGATCGCACC GGCTATGCCA GGGGCACGCT GAGCGTGCGC
GACGGCTTGC CGGCACCGGT GCCGGCGCTG GACAAGGCCG AGTGGCTGAC GATGGGCGAC
ATGATGGGTG ACATGGCCGG CATGCATGGC GCAGACCATG GCGGCATGGC CATGGATCAC
AGCCAGCACG CGATGGACCA CAGCCAGCAT GCGACGCACG GCGCGGCAGC AGACAACCCC
CTCAAGGTCC CCGGCAAGGC CGTGCGCCAC GCACGCACGG AATACGGCGC CAGTACCGAC
ATGCGCGTGG ACACGCCGCG CACGAATCTC GACGACCCCG GCATCGGCCT GCGCAACAAT
GGCAGGCGCG TGCTGACGCT GGCGGACATG CACACGCTCG GTGGCCCGCC GGATCCGCGC
GGGCCGGGGC GAGAGATCGA ACTGCATCTC ACCGGCAATA TGGAGCGCTA TACGTGGTCG
TTCGATGGCG TCGAGTTCGG CAAGTCGACG CCCGTGCATT TCCGCCATGG CGAGCGGCTG
CGCGTCATTC TCCACAACGA CACGATGATG ACCCACCCGA TGCACATGCA CGGCATGTGG
AGCGATCTTG AAGCACCGGA CGGTACGTTC CAGGCACGCC GTCACACGAT CCCGGTGCAG
CCGGCGCAGC GCATCAGCTT CCTGGTCACG GCGGATGCTC TTGGGCGCTG GGCCTGGCAT
TGTCACCTGA TGCTCCATAT GGATGCGGGC ATGTTCCGCG AAGTGGTGGT GTCGTGA
|
|---|
| Protein sequence | MRRDPTTGLL LPNLSRRRFV QGLAAGGVLA GLPVWQGSAH AQPAATAFGT APVLRGTEFD
LVVAESMVNF TGKPALATTI NGMLPGPTLR WREGDTVTIR VTNRLREHTS IHWHGIILPY
QMDGVPGISF GGIAPGETFT YRFKVAQSGS YWYHSHSGFQ EMIGLYGGII VDPAGEDPVR
ADRDYTVLLS DWTDEDPMRV LSKLKVQSDY YNYNQPTAVD FFRDVSNDGL KAALDKRRMW
NQMRMNPTDL ADMSGATLTY LTNGLTPAGN WTGLFRPGER VRLRFINGAG NTFFDVRIPG
LKLRVVQVDG VNIEPVTVDE FRFGPGETCD VVVEPRDDAY TIFSQSMDRT GYARGTLSVR
DGLPAPVPAL DKAEWLTMGD MMGDMAGMHG ADHGGMAMDH SQHAMDHSQH ATHGAAADNP
LKVPGKAVRH ARTEYGASTD MRVDTPRTNL DDPGIGLRNN GRRVLTLADM HTLGGPPDPR
GPGREIELHL TGNMERYTWS FDGVEFGKST PVHFRHGERL RVILHNDTMM THPMHMHGMW
SDLEAPDGTF QARRHTIPVQ PAQRISFLVT ADALGRWAWH CHLMLHMDAG MFREVVVS
|
|---|
| |