| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2327 |
|---|
| Symbol | |
|---|
| ID | 3610322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | + |
|---|
| Start bp | 2565936 |
|---|
| End bp | 2566919 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637691732 |
|---|
| Product | malate dehydrogenase |
|---|
| Protein accession | YP_296533 |
|---|
| Protein GI | 73542013 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01759] malate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAG CCCCAATGCG CGTCGCAGTG ACCGGCGCCG CTGGCCAGAT CGGCTACTCC
CTGCTGTTCC GCATCGCCAA CGGCGACATG CTGGGCAAAG ACCAGCCGGT CATCCTCCAA
CTGCTCGACC TGCCCCAGGC CCAGGCGGCC GTCAAGGGCG TGGTGATGGA ACTGGAAGAC
TGCGCCTTCC CGCTGCTGGC CGGCGTGGTC ATCACCGATG ATCCGAAGGT TGCGTTCAAG
GACGCCGACG TTGCCCTGCT GGTGGGCGCC CGTCCGCGCA GCAAGGGCAT GGAACGCAAG
GACCTGCTCG AAGCCAACGC CCAGATCTTC ACGGTGCAGG GCAAGGCACT CGACGAAGTC
GCCAGCCGCA ACGTCAAGGT GCTGGTGGTC GGCAACCCGG CCAACACCAA CGCCTACATC
GCCATGAAGT CGGCACCGAG CCTGCCGCGC GAAAACTTCA CCGCCATGCT GCGCCTGGAC
CACAACCGTG CCCTGTCGCA GATCGCCGCC AAGACCGGCA AGCCGGTGGC CTCGATCGAG
AAGATGTTCG TGTGGGGCAA CCACAGCCCG ACCATGTACG CCGACTATCG CTACGCGACT
GTCGACGGCA AGAGCGTCAA GGACATGATC AACGATCCGG TGTGGAACAA CGACGTGTTC
CTGCCGACCG TTGGCAAGCG CGGCGCCGCC ATCATCGAAG CGCGTGGCCT GTCGTCGGCT
GCCTCGGCTG CCAACGCCGC CATCGACCAC GTGCATGATT GGGTGCTGGG TACCAACGGC
AAGGTCGTCA CCATGGGCAT CCCGTCGAAC GGCGAGTACG GCATCCCGGC CGACACCATG
TTCGGCTACC CCGTGACCTG CGCCAACGGC AAGTACGAAA TCGTCAAGGG TCTGGAGATC
GACGCCTACA GCCAGGAAAA GATCAACATC ACCCTGAACG AACTGGAAGA AGAGAAGGCC
GGCGTGCAGC ACCTGCTCGG CTGA
|
|---|
| Protein sequence | MAKAPMRVAV TGAAGQIGYS LLFRIANGDM LGKDQPVILQ LLDLPQAQAA VKGVVMELED
CAFPLLAGVV ITDDPKVAFK DADVALLVGA RPRSKGMERK DLLEANAQIF TVQGKALDEV
ASRNVKVLVV GNPANTNAYI AMKSAPSLPR ENFTAMLRLD HNRALSQIAA KTGKPVASIE
KMFVWGNHSP TMYADYRYAT VDGKSVKDMI NDPVWNNDVF LPTVGKRGAA IIEARGLSSA
ASAANAAIDH VHDWVLGTNG KVVTMGIPSN GEYGIPADTM FGYPVTCANG KYEIVKGLEI
DAYSQEKINI TLNELEEEKA GVQHLLG
|
|---|
| |