| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2317 |
|---|
| Symbol | livM |
|---|
| ID | 3609023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 2555439 |
|---|
| End bp | 2556716 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637691722 |
|---|
| Product | leucine/isoleucine/valine transporter permease subunit |
|---|
| Protein accession | YP_296523 |
|---|
| Protein GI | 73542003 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.433018 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAACC GGACTTCTGC AATGCCCGCA AACCGGGCTT CTGCCCTGCC CGCAGGGCAA
TCCCTGAAGA ATGCCGTGGT GGCCGCGGTG ATGACGGCCA TCCTGACCAT TCCCGTGCTC
GGCCTGCAAC TCAAGCTGGA CGGCTACAAG GTCGTGCTGG AGTCGCACTG GCGGCCGGTG
TGGATCGCCG TGGCGGCGGT CTTCCTGTTC CAGCTGTTCA AGCCGCTGCT GTCGCGTGCC
GGCAGCGCCG TGCGCATGCC GGCCATGCCG CAACTCGGCG TCGGCCAGCA GCGCGCGGCG
GTGTGGGTGC TGCTGGCCGT GGGCCTCGTG TGGCCTTTCT TCGGCTCGCG CGGTGCGGTG
GATGTGGCGA CGCTTGCGTT GATCTACGTG ATTCTCGGGC TTGGCCTGAA TATCGTGGTC
GGCTTCGCCG GACTGCTGGA CCTTGGCTAC GTGGGCTTCT ACGCCGTGGG TGGCTATACC
TACGCCATGC TGAACCAGTA CTTCGGCCTC GGCTTCTGGG AATGCCTGCC GATTGCTGCA
GCGATGTCTG CCACCTTCGG CTTCCTGCTC GGCTTCCCTG TGCTGCGCCT GCGCGGTGAC
TACCTGGCCA TCGTGACGCT GGGCTTCGGC GAGATCATCC GCCTGCTCGC GCGCAACCTG
ACCGAGTACA CCGGCGGCCC GGACGGAATC TCGGGCATTC CGAAGCCCAC TGTATTCGGC
TTCGAGATGG CGCGCAGCGC CACCGTCGAA GGCGCACGCA CTTTCCATGA GCTGATCGGG
CTGGACTACA AGGGCGAGCA CATGGTGATC TTCCTGTACC TGCTCGCGCT GCTGCTGGTG
GGCTTCACGC TGTTCGTAAC CAGCCGCCTG ATCCGCATGC CGATGGGCCG TGCGTGGGAA
GCGCTGCGCG AGGACGAGAT CGCGTGCCGA TCGCTGGGCA TGAACCCGAC CCGCATCAAG
CTGTCGGCGT TCACGCTGGG GGCGGCGTTC GCGGGCATCG GCGGCGCGTT CTTCGCGGCC
CGCCAGGGAC TGGTCAATCC GGAATCGTTC ACCTTCATCG AATCGGCGCT GGTGCTGGCC
GTGGTGGTGC TGGGCGGCAT GGGTTCGCAG CTGGGCGTGA TCCTCGCCGC GATCCTGCTG
ACCGTGCTGC CCGAAGTGGC GCGCGGTTTC GCCGAATACC GCATGCTGAT TTTCGGCCTG
GTGATGGTGC TGATGATGAT GTGGCGTCCG CAGGGCCTGC TGCCCGCGAG CCGTCCGCAC
GTGGAGCTTC CCCGATGA
|
|---|
| Protein sequence | MTNRTSAMPA NRASALPAGQ SLKNAVVAAV MTAILTIPVL GLQLKLDGYK VVLESHWRPV
WIAVAAVFLF QLFKPLLSRA GSAVRMPAMP QLGVGQQRAA VWVLLAVGLV WPFFGSRGAV
DVATLALIYV ILGLGLNIVV GFAGLLDLGY VGFYAVGGYT YAMLNQYFGL GFWECLPIAA
AMSATFGFLL GFPVLRLRGD YLAIVTLGFG EIIRLLARNL TEYTGGPDGI SGIPKPTVFG
FEMARSATVE GARTFHELIG LDYKGEHMVI FLYLLALLLV GFTLFVTSRL IRMPMGRAWE
ALREDEIACR SLGMNPTRIK LSAFTLGAAF AGIGGAFFAA RQGLVNPESF TFIESALVLA
VVVLGGMGSQ LGVILAAILL TVLPEVARGF AEYRMLIFGL VMVLMMMWRP QGLLPASRPH
VELPR
|
|---|
| |