| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2274 |
|---|
| Symbol | |
|---|
| ID | 3610674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 2504320 |
|---|
| End bp | 2505378 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637691679 |
|---|
| Product | ribosomal large subunit pseudouridine synthase C |
|---|
| Protein accession | YP_296481 |
|---|
| Protein GI | 73541961 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAGT TACGCCATCA AATTGAAACA GGGACAAAGT CTGCGCCCGC GGGCCCCCAG
GTGGCGTATG TCACGATTGA CGAAGGCGCC GAAGGGCAGC GTATCGACAA CTTCCTGCTG
AAGGTTTCCA AGGGGGTGCC GAAGAGCCAT ATCTACCGGG TGCTGCGCTC GGGCGAGGTT
CGCGTCAACA AGGGGCGCGT CGATGCTACC TACCGGCTGC AGATCGGGGA TGTCGTGCGT
ATTCCGCCGA TGCGGGTGGC GGAACCTTCA CAAACGACGC GGCATCCCGT GCCGGCAGCC
GACTTTCCGG TGCTGTTCGA GGACGCGCAC TTGCTGGTCA TCAATAAGCC GGCCGGCGTG
GCCGTCCACG GCGGTTCCGG GGTGGCTTTC GGCGTCATCG AACAACTGCG CAAGGCGCGG
CCGCAGGCCA AGTTTCTCGA ACTGGTTCAT CGACTCGACC GCGAGACGTC GGGCATCCTG
GTGCTGGCCA AGAAGCGCTC GGCGCTGGTC GACCTGCACG AGCAGATCCG CGGCAACAGC
ATGGACAAGC GCTACTTTGC CTGCGTGGCC GGCGAATTCC CCAACAACCG CCAGCACGTC
AAGCTGCCTC TATATAAGTA CAGTACGCCG GACGGCGAGC GCCGGGTCCG CGTCCAGGAA
GATGGCCTTC CCTCGCATAC CGTATTCAGC CGGGTCGAGG CATTTCCCGG CTTCACGCTG
CTGGAAGCGG AACTGAAGAC CGGCCGCACG CATCAGATCC GCGTGCACCT GGCGCACTCG
GGCTATCCGA TCATTGGTGA CGAAAAATAC GGTGACTTCG CGCTCAACAA GCAACTGGCC
CGCGCCGGCG CGCGGCCGGG CATCAAGCGC ATGTTCCTGC ACGCGCACCG GCTGACGTTT
GTCCATCCGG GTACGCGCGA GCCTCTTGTG GTGGCGGCGC CACTGCCGGA CGAATGCACC
GGATTCCTGC AACAATTGCG CAGCCAGAGC AATCAGGGCA CTCCGAAGCC GGGTGCCTAC
CCAGCCAACA AGGAAACCAA TGGCCAGGCA ACAATTTGA
|
|---|
| Protein sequence | MNELRHQIET GTKSAPAGPQ VAYVTIDEGA EGQRIDNFLL KVSKGVPKSH IYRVLRSGEV
RVNKGRVDAT YRLQIGDVVR IPPMRVAEPS QTTRHPVPAA DFPVLFEDAH LLVINKPAGV
AVHGGSGVAF GVIEQLRKAR PQAKFLELVH RLDRETSGIL VLAKKRSALV DLHEQIRGNS
MDKRYFACVA GEFPNNRQHV KLPLYKYSTP DGERRVRVQE DGLPSHTVFS RVEAFPGFTL
LEAELKTGRT HQIRVHLAHS GYPIIGDEKY GDFALNKQLA RAGARPGIKR MFLHAHRLTF
VHPGTREPLV VAAPLPDECT GFLQQLRSQS NQGTPKPGAY PANKETNGQA TI
|
|---|
| |