Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Reut_A2259 |
Symbol | |
ID | 3610602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia eutropha JMP134 |
Kingdom | Bacteria |
Replicon accession | NC_007347 |
Strand | - |
Start bp | 2492460 |
End bp | 2493059 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637691664 |
Product | RNA polymerase sigma factor RpoE |
Protein accession | YP_296466 |
Protein GI | 73541946 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02939] RNA polymerase sigma factor RpoE |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.033618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGAAC GCGAAGCCGA TCAGCTCCTA GTTGAACGCG TCCAGCAGGG CGACAAGCGG GCCTTTGAGC TGCTGGTGGC AAAGTACCAC CGGAAGATCA TCCGCCTGAT TTCGCGCCTG GTGAGAGATC CCGCCGAAGT CGAGGATGTG GCGCAGGATG CCTTTATCAA GGCATATCGT GCCTTGCCCC AATTCCGCGG GGAATCCGCC TTCTACACAT GGCTGTACCG GATCGCCGTG AACACGGCCA AGAACTATCT GGCTACGCAG GGACGACGAC CCGAGGCGTC CACCGACATC GATACGGAAG AGGCTGAAAC TTTTGCGGAC GGTGAGCAAC TAAGGGATAT CAATACGCCG GAGTCGATGC TTCACACGCG CCAAGTCGCC GAAACGGTGA ACCGAGCGAT GGAAGCGTTG CCGGAAGAGT TGCGTACCGC CATCACCCTG CGCGAGATCG AAGGCCTCAG CTATGAGGAA ATCGCGGAGG CGATGGGTTG CCCGATCGGA ACGGTGCGTT CACGCATTTT CCGTGCGCGT GAGGCGATTG CTGAAAAATT GCGCCCGCTG CTGGGAACGG CAGAGGGCAA GCGATGGTAG
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Protein sequence | MSEREADQLL VERVQQGDKR AFELLVAKYH RKIIRLISRL VRDPAEVEDV AQDAFIKAYR ALPQFRGESA FYTWLYRIAV NTAKNYLATQ GRRPEASTDI DTEEAETFAD GEQLRDINTP ESMLHTRQVA ETVNRAMEAL PEELRTAITL REIEGLSYEE IAEAMGCPIG TVRSRIFRAR EAIAEKLRPL LGTAEGKRW
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