Gene Reut_A2203 details

Gene Information

• Locus tag: Reut_A2203
• ID: 3609997
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia eutropha JMP134
• Kingdom: Bacteria
• Replicon accession: NC_007347
• Strand: +
• Start bp: 2435026
• End bp: 2437047
• Gene Length: 2022 bp
• Protein Length: 673 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637691603
• Product: PAS:GGDEF
• Protein accession: YP_296410
• Protein GI: 73541890
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2199] FOG: GGDEF domain
• TIGRFAM ID: [TIGR00229] PAS domain S-box; [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.239318
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCCTGG GACCGGAAAA CGGGTCAGTG CGCAGAAGAA AAGTAACCAT GCGTCACTCA 
ATAAAGCTGC GGATGGCGGT GGCAACCGCC ATGGTGGTTA CGTTGATCAT CGTGCTGCGG 
GCGCTCTACT CGCAGTACTA CGCGTACCAC ACGCTGAAGG AGCTGCTGCA GAACCATCAG 
GACTCGCAAG TCCGGATGGT GGCCGAACAG CTCGATGGAA AGTTCGAGAT TCGGGCGTCC 
ATGCTGCGCC ATATGGCCCA GCAGTTTGCG CCCATGCTTG GCAGTCGCCC TGCCGAACTC 
CGACGCATGG CGGCACAAAT GCCGGATTTG CCGGACACCT TCAACGCCGT CTTCATGGCC 
GCTCCATCAG GCGAAATGAT CTTCAGCACG GCCGTGCCGG AAGGCGTGCG TATGAGCCTC 
AGCGACCGCG ACTATTTCCG GGCGATTGTG CGCGGCGCGC CGTTTGCCGT ATCCGACCTG 
CTGCAGGGCA AGCTCACCAG GTCGCCCGGG GTGGTATTGG CAGTTCCGCT GCGCGGCCCC 
GGCGGCGAAC TGCGTGCTGT GCTCGGCGGC GTGATCAACC TTTCTCTGGA CAATTTCCTG 
CGCGAACTGG CGCGCAGTCC GGTCGGCGTC ACGGGTAGCT ACTGCCTGGT TTCCGCCGGC 
CCCCGACCGC GCTACGCGAT GCACCGGGAT CCGGCCAAGC TGCTGACGCC CGCCCGCGCC 
ATCGGCGAGA CGTGTGGCGC GGACCAGCCC GAGTCGTTCT GGGAGCCGAT CCGTCCGCGC 
CGGCCGATCG TGGGTCGTTA CCTGCTGGAA TCGAATGGCT GGGAGTTGGT CGCAGTCCTG 
CCTGCCAACG AGGCCTATGC GCCGCTGATC GAAGCCAGGC GCCGAATGTT CGCCATTGTC 
GGCCTCTCGC TATTGGTTGC CGGCGCGCTG ATGTGGCTGG CGATGTGGCG CTTGCTGGCG 
CCGCTGCACC GGCTGCATCG CGCCGTGCGA GGCATCACTG CCAACCCGGC CGCCATCAAG 
GAACTGCCAG TCGGCCGCGA GGACGAAATC GGCGAACTCG CTTCCACGTT CGCCGAAGTC 
ATGCACCAGC TTTCCGAGCG CGAAGCCGCG CTGAAAGCCG CCAAGGACCA CGCCGCCGAG 
AGCGAGAAGC GCATCGAGGC GATCGCCAAC CATGTACCCG ACTTTGTCTC GTTCATCGAC 
ATGAATGAGC GCTTCGTCTT CGTCAACCAG GCCTACGCAC GCCATTTCGG CTTGCCGGCA 
CAGCAGATCA TCGGCCTGAC GTTGCGCGAG CTATGGGGCA CGCAGGCCTA TCTGGCCTCG 
CGGCCCTACC TGGAGCAGGC GCTGGCGGGC AAGGTCGTCA GGTTTACGCG CGAGAGCCCG 
GACGGCTCCG AATGCATGCA GTTCACCTGC CAGCCAGCCT GGAACGACAC GCATGACGCG 
ATCCATGGCA TGCACCTGTT CGCACGCAAT GTCACGAGCG AGCGCCAGAA GCTGCGCAGC 
CTGGAAGCGC AGACCGTGTC GGACCACCTG ACCGGACTGC TGAACCGCAA GGGCTTCGAC 
CGACGCTTTG CCGAAGCACT GGCGCGCGCC GATGACAGCG GCCAGGCGGC AGCGCTATTG 
CTGGTCGACC TGGACGACTT CAAGGCCGTC AATGACGGCT ACGGGCATTC GATCGGCGAT 
CGCCTGCTGG TCGCTTTCGC GCAGCGCCTG ACCCGCAGCG TGCGCAAGAA CGATGCCGTG 
GCGCGCATCG GGGGCGACGA GTTTGCGGTG ATCCTCGAAA ACGTGGGCGA TGTCCGCGCG 
GTCGAGCGTA TCGCCAGCAC CATCGTGCAA ACTGCGCTGG CACCGGTGAT CATCGACGGC 
CATGAACATG CGGCCACGGT CAGCGTCGGC TCGGCGATCC ACCGCCCCGG ACAGGGCATG 
TCCGTGAGCG AGCTGTTCAT GCGGGCCGAC ATGGCGCTGT ATGAAGCCAA GCGCCATGGC 
AAGGCCCGCT ACGCGGCGCC GCTGGAAGAT TCGACGGCCT GA 

 

Protein sequence

MPLGPENGSV RRRKVTMRHS IKLRMAVATA MVVTLIIVLR ALYSQYYAYH TLKELLQNHQ 
DSQVRMVAEQ LDGKFEIRAS MLRHMAQQFA PMLGSRPAEL RRMAAQMPDL PDTFNAVFMA 
APSGEMIFST AVPEGVRMSL SDRDYFRAIV RGAPFAVSDL LQGKLTRSPG VVLAVPLRGP 
GGELRAVLGG VINLSLDNFL RELARSPVGV TGSYCLVSAG PRPRYAMHRD PAKLLTPARA 
IGETCGADQP ESFWEPIRPR RPIVGRYLLE SNGWELVAVL PANEAYAPLI EARRRMFAIV 
GLSLLVAGAL MWLAMWRLLA PLHRLHRAVR GITANPAAIK ELPVGREDEI GELASTFAEV 
MHQLSEREAA LKAAKDHAAE SEKRIEAIAN HVPDFVSFID MNERFVFVNQ AYARHFGLPA 
QQIIGLTLRE LWGTQAYLAS RPYLEQALAG KVVRFTRESP DGSECMQFTC QPAWNDTHDA 
IHGMHLFARN VTSERQKLRS LEAQTVSDHL TGLLNRKGFD RRFAEALARA DDSGQAAALL 
LVDLDDFKAV NDGYGHSIGD RLLVAFAQRL TRSVRKNDAV ARIGGDEFAV ILENVGDVRA 
VERIASTIVQ TALAPVIIDG HEHAATVSVG SAIHRPGQGM SVSELFMRAD MALYEAKRHG 
KARYAAPLED STA