| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_A2138 |
|---|
| Symbol | |
|---|
| ID | 3610561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia eutropha JMP134 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007347 |
|---|
| Strand | - |
|---|
| Start bp | 2357468 |
|---|
| End bp | 2359207 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637691536 |
|---|
| Product | Alpha/beta hydrolase fold:Poly-beta-hydroxybutyrate polymerase, N-terminal |
|---|
| Protein accession | YP_296346 |
|---|
| Protein GI | 73541826 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
|---|
| TIGRFAM ID | [TIGR01839] poly(R)-hydroxyalkanoic acid synthase, class II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.527103 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAG CCGTGGGTAC GAGAACGCTG GCGAAGACGA CAAAGAAGGC GAAGAAGCCG
GCAGCCAGTG CTGTCGCTCC GGAGGCAATT GTTGACAGCG CGCCGGCCAT GACGGGACCG
AACCCGTTCG TGGGGCTGCG CCCCGAAGAT ATGGTCAGCA CCGCGCAGCA GATCGGCGCG
CAGTGCGTGC AGGAACCGAC CTTGCTGCTG CAGCAGCAGA CCAAGCTCGC GCAGGACCTG
TTCGCGGTCG TGGACGGCTC GGCGCCGCCG CCGTGCACGC GTGACCGCCG CTTCGGCGAT
CCGGCATGGC AGGATAACCC GGTCTATCGC ATGGCCCTGC AGGGATATCA GGCCTGGCGC
GATGCGCTGA CCGGCTTCGT CACCGGCTCG GTCATGGACG GTCGCAGCAA GGAACGCGCG
CAGTACTTCA CCGACCTGCT GATCGACGCC GTGGCGCCGA CCAATACGCT ACTGGGGAAT
CCGGCTGCAT TGCGGAAGAC GTTCGAGTCG GGTGGTCTGA ACCTGGTCAG CGGCCTGGTC
AACCTGTTGA CCGATACGCT GACGAACCAG GGCATGCCGT CCCAGGTGGA CAAGAGCGCG
TTCCGTATCG GCAAGGATCT GGCCGCCACG CCAGGCGCGG TGGTTTTCCG CAACGATGTC
CTGGAGCTGA TCCAGTACAC GCCGACCACG GCAAACGTGC ATGCCCGTCC GCAGCTCATC
GTGCCGCCGC AGGTCAACAA GTTCTATGTG TTTGACCTGT CGCAGGGCAA GAGCATGGTC
GAGTACCTGG TGCGCAATGA GATGCAGGTG TTCATGGTGA GCTGGCGCAA TCCCACCACG
TTGCACCGCG ACTGGAACCT CGACACCTAT GTCGGTGCGC TGATCGAAGC GATCCACGCG
ATCCGCGACA TCACTGGCAG CCCCGACGTG AACCTGCATG GCGCGTGCTC GGGCGCGATG
ACGATGTCCG CGCTCATGGG GTACTGCGCA GCGCGCGGCG AAAAGCTCGT GAATGCCGCC
ACGCTGATGG TGTCCGTGTT CGGCCTCGAC TCGCAGTCCC AGCTCGGACT GTTTGCCACG
CCGGAAGCCA TCGATGCCGC GCGGCAGGGC AGCCAGGCGC GCGGTGTGCT GGATGGCGGG
GAACTCGGGC GCGTGTTCGC CTGGATGCGG CCCAATGACC TGGTGTGGAA CTACTGGGTC
AACAACTACC TGCTGGGCAA GGCGCCGCCG GCGTTCGACA TCCTCTACTG GAACAACGAC
ACCACGCGCC TGCCCGCCGG CCTGCACGGC CAGTTGCTGG ACATGCTGAC GCTGAACCAG
CTGTCGACAC CGGGCGCGCT GCGCGTGCTT GGCCAGCCGA TCGACCTTTC GGCTGTTGAT
TGCGACAAGT ATGTGCTTGC CGGCATGACC GACCACATCA CGCCGTGGAA GGGCGTGTAC
CGCTCGGTGC GCGCGTTCGG CGGCAAGACC GAGTTCGTGC TCAGCTCCAG CGGTCATGTG
CAGAGCCTCA TCAACCCGCC GGGAAATGCC AAGGCGAAGT TCTTCCTGAA CGACGCGCAG
ATGGCGGACC CGGAAGCGTG GCTCGAGGGT GCCACGGTCA CCCCGTCGTC CTGGTGGGAG
CACTGGAGCG AGTGGCTGAA AACGCGTTCT GGCCCCCTGA ACGCCGCGCC GTCCCGCCTG
GGCAGCGACC GCCATGCGCC ATGCGCCGAC GCGCCGGGAC GCTATGTGAC CGAGGCGTAA
|
|---|
| Protein sequence | MTTAVGTRTL AKTTKKAKKP AASAVAPEAI VDSAPAMTGP NPFVGLRPED MVSTAQQIGA
QCVQEPTLLL QQQTKLAQDL FAVVDGSAPP PCTRDRRFGD PAWQDNPVYR MALQGYQAWR
DALTGFVTGS VMDGRSKERA QYFTDLLIDA VAPTNTLLGN PAALRKTFES GGLNLVSGLV
NLLTDTLTNQ GMPSQVDKSA FRIGKDLAAT PGAVVFRNDV LELIQYTPTT ANVHARPQLI
VPPQVNKFYV FDLSQGKSMV EYLVRNEMQV FMVSWRNPTT LHRDWNLDTY VGALIEAIHA
IRDITGSPDV NLHGACSGAM TMSALMGYCA ARGEKLVNAA TLMVSVFGLD SQSQLGLFAT
PEAIDAARQG SQARGVLDGG ELGRVFAWMR PNDLVWNYWV NNYLLGKAPP AFDILYWNND
TTRLPAGLHG QLLDMLTLNQ LSTPGALRVL GQPIDLSAVD CDKYVLAGMT DHITPWKGVY
RSVRAFGGKT EFVLSSSGHV QSLINPPGNA KAKFFLNDAQ MADPEAWLEG ATVTPSSWWE
HWSEWLKTRS GPLNAAPSRL GSDRHAPCAD APGRYVTEA
|
|---|
| |