Gene Reut_A2107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_A2107 
Symbol 
ID3611361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007347 
Strand
Start bp2315793 
End bp2316773 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content67% 
IMG OID637691499 
Producthydroxymethylglutaryl-CoA lyase 
Protein accessionYP_296315 
Protein GI73541795 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.483824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCG CCGAATTCAA CTCCCCGGCC TTGCGCGGCC CAGCCCGTAT CGAGATCAAC 
GAAGTGTCGC CTCGCGACGG CCTGCAGATC GAGCCGGTCG TGGTGCCTAC CGATGCCAAG
GTCGCCTTTG TCGATGCGCT GTCCGCCTGT GGCTTCGCGC GCATCGAAGC CACATCGTTC
ACATCGGCCA AGGCCATCCC GGCGCTTGCG GATGCCGAAG CGCTGATGCA CCGCATGCAT
CGCCGGCCCG GCGTGCGCTA TACCGCGCTG GTGCCGAACC TCCGTGGCCT GGAGCGCGCG
CTTTCGTGCC GGCCCGATGA GGTCAACCTG GTGATGTCGG TCAGCGAAAC CCACAACCGC
GCGAACCTGC GCATGACGCG TGCGCAATCG GAGGCGCAGT TGCTCGCGAT GATCGCTGAG
GCCCGCGCGG CCGGTGTGCC GGTCAACGTG TCGCTGTCGA CGGTGTTCGG TTGTCCGTTC
GAGGGCGAGG TGAGCACTGA CGCCGTGATG GCATTGGCTC ACAGCTTTGC GGAGGCCGGC
GCGCAAGGCA TCACGCTGTG CGATACCACC GGCATGGCTT TTCCGAACCA GGTCGCGCAG
ATGTGCGAGC AGTTCCAGCA ACGCCTGCCG GATACGGGCC TGACCATTCA TCTTCACAAC
ACGCGCGGCA TGGGTTTGGC GAATGCCGTG GCAGCCTGGG AAACCGGCGT CACACGCTTC
GATGCCGCGG CCGGCGGCCT TGGTGGCTGC CCCTATGCGC CCGGTGCGAG CGGCAATGTC
AGTACTGAGG AGCTCGTGCA CATGTTTGCC TGCATGGGCG TGCAGACCGG CGTGGACCTG
CCTGCGCTGC TCGATGTCGT CGCCGGCATT CCCGCGCTGG TGGAACGCGA CATCGGCAGC
CAACTGCTGC GCGCCGGCCC GCGCCTGCGC ACGCATCAGC CGCCAGCCTG GCTGGCAGAG
CATTTCGCCG GACAGGACTA G
 
Protein sequence
MSAAEFNSPA LRGPARIEIN EVSPRDGLQI EPVVVPTDAK VAFVDALSAC GFARIEATSF 
TSAKAIPALA DAEALMHRMH RRPGVRYTAL VPNLRGLERA LSCRPDEVNL VMSVSETHNR
ANLRMTRAQS EAQLLAMIAE ARAAGVPVNV SLSTVFGCPF EGEVSTDAVM ALAHSFAEAG
AQGITLCDTT GMAFPNQVAQ MCEQFQQRLP DTGLTIHLHN TRGMGLANAV AAWETGVTRF
DAAAGGLGGC PYAPGASGNV STEELVHMFA CMGVQTGVDL PALLDVVAGI PALVERDIGS
QLLRAGPRLR THQPPAWLAE HFAGQD